RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 GZMAP12544 262 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 ZAP70P43403 619 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 TBCKQ8TEA7 893 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 KIFC1Q9BW19 673 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 PNPLA8Q9NP80 782 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 SYNPO2Q9UMS6 1093 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 TRIM64CA6NLI5 447 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 WEE2P0C1S8 567 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 F8A1P23610 371 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 HAUS6Q7Z4H7 955 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 MS4A14Q96JA4 679 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 CINPQ9BW66 212 aaPredicted RBP9.06□□□□□ -0.96
TTC28-208ENST00000612946 ZNF180Q9UJW8 692 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 TMCC3Q9ULS5 477 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 GSTK1Q9Y2Q3 226 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 ATP10AO60312 1499 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 CLUHO75153 1309 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 RP1L1Q8IWN7 2480 aaPredicted RBP9.06□□□□□ -0.96
TTC28-208ENST00000612946 MAGI2Q86UL8 1455 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 PI4K2BG5E9Z4 385 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 ASMTLO95671 621 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 LIN52Q52LA3 116 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 DENND5AQ6IQ26 1287 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 CDCA7Q9BWT1 371 aaPredicted RBP9.06□□□□□ -0.96
TTC28-208ENST00000612946 GOLPH3Q9H4A6 298 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 EHD3Q9NZN3 535 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 SYNCRIPO60506 623 aaKnown RBP9.06□□□□□ -0.96
TTC28-208ENST00000612946 RBP1P09455 135 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 AQP5P55064 265 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 RAB2AP61019 212 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 NDUFAF6Q330K2 333 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 PI16Q6UXB8 463 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 ADCY4Q8NFM4 1077 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 FAM167AQ96KS9 214 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 TRNAU1APQ9NX07 287 aaKnown RBP9.06□□□□□ -0.96
TTC28-208ENST00000612946 SLC5A4Q9NY91 659 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 MAGEB2O15479 319 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 SORBS3O60504 671 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 MAPK6Q16659 721 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 CYP2U1Q7Z449 544 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 SLC26A11Q86WA9 606 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 INTS2Q9H0H0 1204 aaKnown RBP9.06□□□□□ -0.96
TTC28-208ENST00000612946 COMMD9Q9P000 198 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 PALLDQ8WX93 1383 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 C3orf70A6NLC5 250 aaPredicted RBP9.06□□□□□ -0.96
TTC28-208ENST00000612946 FCHO1O14526 889 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 SMNDC1O75940 238 aaKnown RBP eCLIP9.06□□□□□ -0.96
TTC28-208ENST00000612946 KRT36O76013 467 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 ANXA1P04083 346 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 MAPK11Q15759 364 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 C12orf56Q8IXR9 622 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 TRPV1Q8NER1 839 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 EPS8L3Q8TE67 593 aaKnown RBP9.06□□□□□ -0.96
TTC28-208ENST00000612946 ZC3H12CQ9C0D7 883 aaKnown RBP9.06□□□□□ -0.96
TTC28-208ENST00000612946 GTF3C4Q9UKN8 822 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 COQ6Q9Y2Z9 468 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 TNRQ92752 1358 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 UBA6A0AVT1 1052 aaPredicted RBP9.06□□□□□ -0.96
TTC28-208ENST00000612946 MAD2L1Q13257 205 aaPredicted RBP9.06□□□□□ -0.96
TTC28-208ENST00000612946 ACVR2BQ13705 512 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 NEDD8Q15843 81 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 ABCB5Q2M3G0 1257 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 SLC13A5Q86YT5 568 aaPredicted RBP9.06□□□□□ -0.96
TTC28-208ENST00000612946 THNSL1Q8IYQ7 743 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 C1orf54Q8WWF1 131 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 MYLPFQ96A32 169 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 GANQ9H2C0 597 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 HPS4Q9NQG7 708 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 GGT7Q9UJ14 662 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 PLCL2Q9UPR0 1127 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 USP32Q8NFA0 1604 aa9.06□□□□□ -0.96
TTC28-208ENST00000612946 SASH3O75995 380 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 ZNF667Q5HYK9 610 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 RAB42Q8N4Z0 105 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 GPN3Q9UHW5 284 aaPredicted RBP9.05□□□□□ -0.96
TTC28-208ENST00000612946 CYP2D7A0A087X1C5 515 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 M0R2C6 588 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 HAT1O14929 419 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 CFBP00751 764 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 PSMB9P28065 219 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 METTL23Q86XA0 190 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 GPIHBP1Q8IV16 184 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 STARD8Q92502 1023 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 PRDM16Q9HAZ2 1276 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 EIF3LQ9Y262 564 aaKnown RBP9.05□□□□□ -0.96
TTC28-208ENST00000612946 MROH7-TTC4A0A0A0MT08 1334 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 VAMP7P51809 220 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 HIRAP54198 1017 aaPredicted RBP9.05□□□□□ -0.96
TTC28-208ENST00000612946 CDH19Q9H159 772 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 ERVK-7P63135 1459 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 CCNKO75909 580 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 HOXB8P17481 243 aaPredicted RBP9.05□□□□□ -0.96
TTC28-208ENST00000612946 GTF2H1P32780 548 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 ADD2P35612 726 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 MSLNQ13421 630 aaPredicted RBP9.05□□□□□ -0.96
TTC28-208ENST00000612946 PSMA8Q8TAA3 256 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 PTPRN2Q92932 1015 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 ZNF577Q9BSK1 485 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 SLC6A15Q9H2J7 730 aa9.05□□□□□ -0.96
TTC28-208ENST00000612946 ARHGEF38Q9NXL2 777 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms