RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 SLC27A1Q6PCB7 646 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 ARCQ7LC44 396 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 ANKRD42Q8N9B4 389 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 BEST2Q8NFU1 509 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 UBA3Q8TBC4 463 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 MGARPQ8TDB4 240 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 DENND1AQ8TEH3 1009 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 RNF157Q96PX1 679 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 TGS1Q96RS0 853 aaKnown RBP10.92□□□□□ -0.66
PABPC1-224ENST00000610907 SMC6Q96SB8 1091 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 CALN1Q9BXU9 219 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 TRABDQ9H4I3 376 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 CYLDQ9NQC7 956 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 HAUS2Q9NVX0 235 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 HESX1Q9UBX0 185 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 SLC12A4Q9UP95 1085 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 PLXNB2O15031 1838 aa10.92□□□□□ -0.66
PABPC1-224ENST00000610907 IQCA1LA6NCM1 817 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 CFAP73A6NFT4 308 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 CSDE1O75534 798 aaKnown RBP10.91□□□□□ -0.66
PABPC1-224ENST00000610907 ECM2O94769 699 aaPredicted RBP10.91□□□□□ -0.66
PABPC1-224ENST00000610907 ASMTLO95671 621 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 PFKMP08237 780 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 CD48P09326 243 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 ZNF286BP0CG31 522 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 KRT15P19012 456 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 TGM2P21980 687 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 CDH6P55285 790 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 SLC6A3Q01959 620 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 ROR1Q01973 937 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 RNASELQ05823 741 aaKnown RBP10.91□□□□□ -0.66
PABPC1-224ENST00000610907 ORC1Q13415 861 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 ACVR2BQ13705 512 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 GRB14Q14449 540 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 SPARCL1Q14515 664 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 MTFR1Q15390 333 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 FBXW10Q5XX13 1052 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 ARHGAP17Q68EM7 881 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 ADGRD1Q6QNK2 874 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 FAM183BPQ6ZVS7 135 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 SPATA21Q7Z572 469 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 DPP9Q86TI2 863 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 PNMA8AQ86V59 439 aaPredicted RBP10.91□□□□□ -0.66
PABPC1-224ENST00000610907 SESTD1Q86VW0 696 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 SPATA18Q8TC71 538 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 HSPH1Q92598 858 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 ALKBH8Q96BT7 664 aaKnown RBP10.91□□□□□ -0.66
PABPC1-224ENST00000610907 RTP4Q96DX8 246 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 MS4A4AQ96JQ5 239 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 DHRS4Q9BTZ2 278 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 ADAMTS10Q9H324 1103 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 ACSS3Q9H6R3 686 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 FGFR1OP2Q9NVK5 253 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 SLC5A4Q9NY91 659 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 SAE1Q9UBE0 346 aaPredicted RBP10.91□□□□□ -0.66
PABPC1-224ENST00000610907 PRKAG3Q9UGI9 489 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 RABGEF1Q9UJ41 708 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 CITO14578 2027 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 NRCAMQ92823 1304 aa10.91□□□□□ -0.66
PABPC1-224ENST00000610907 SMIM35A0A1B0GVV1 85 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 BTBD19C9JJ37 291 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 E5RJQ4 531 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 POC1B-GALNT4F8VUJ3 575 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 MDM4O15151 490 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 CHADO15335 359 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 SMPD1P17405 629 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 CYP3A5P20815 502 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 HOXA11P31270 313 aaPredicted RBP10.9□□□□□ -0.66
PABPC1-224ENST00000610907 SDC4P31431 198 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 GDF10P55107 478 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 GPX6P59796 221 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 FKBP1BP68106 108 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 FASTKD3Q14CZ7 662 aaKnown RBP10.9□□□□□ -0.66
PABPC1-224ENST00000610907 GOLGA7BQ2TAP0 167 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 CCDC14Q49A88 953 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 RNF43Q68DV7 783 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 NOTUMQ6P988 496 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 DARS2Q6PI48 645 aaKnown RBP10.9□□□□□ -0.66
PABPC1-224ENST00000610907 C3orf62Q6ZUJ4 267 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 CYP4V2Q6ZWL3 525 aaPredicted RBP10.9□□□□□ -0.66
PABPC1-224ENST00000610907 GPR142Q7Z601 462 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 UNC45BQ8IWX7 931 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 PALM2Q8IXS6 379 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 OR6J1Q8NGC5 347 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.9□□□□□ -0.66
PABPC1-224ENST00000610907 SLC35F5Q8WV83 523 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 MAML3Q96JK9 1138 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 SNX27Q96L92 541 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 TINF2Q9BSI4 451 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 PRDM16Q9HAZ2 1276 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 SLC40A1Q9NP59 571 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 KLC4Q9NSK0 619 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.9□□□□□ -0.66
PABPC1-224ENST00000610907 PAK5Q9P286 719 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 XPO7Q9UIA9 1087 aaKnown RBP10.9□□□□□ -0.66
PABPC1-224ENST00000610907 STARD13Q9Y3M8 1113 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 CLUHO75153 1309 aa10.9□□□□□ -0.66
PABPC1-224ENST00000610907 CCL15-CCL14A0A0B4J2E2 113 aa10.9□□□□□ -0.67
PABPC1-224ENST00000610907 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.9□□□□□ -0.67
PABPC1-224ENST00000610907 BCLAF3A2AJT9 711 aaKnown RBP10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms