RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, human

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRN4-223	ENST00000602223	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.17	□□□□□ -0.3	3e-7	■■■■■ 65.8
STRN4-223	ENST00000602223	PRMT8	Q9NR22	394 aa	Predicted RBP	13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	ARHGAP26	Q9UNA1	814 aa		13.17	□□□□□ -0.3
STRN4-223	ENST00000602223	OTOL1	A6NHN0	477 aa	Predicted RBP	13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	TNFRSF10B	O14763	440 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	PSMA7	O14818	248 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	STX10	O60499	249 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	AP1G2	O75843	785 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	RTN3	O95197	1032 aa	Predicted RBP	13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	OAS1	P00973	400 aa	Known RBP	13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	CCDC130	P13994	396 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	PPP1R2	P41236	205 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	STIM1	Q13586	685 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	LRRC32	Q14392	662 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	PDGFRL	Q15198	375 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	ZC3H14	Q6PJT7	736 aa	Known RBP	13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	MAMSTR	Q6ZN01	415 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	CCDC150	Q8NCX0	1101 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	FBXL13	Q8NEE6	735 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	ZMIZ2	Q8NF64	920 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	SLC2A14	Q8TDB8	520 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	OVCA2	Q8WZ82	227 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	SEMA4D	Q92854	862 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	CHFR	Q96EP1	664 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	DHTKD1	Q96HY7	919 aa	Predicted RBP	13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	FAXDC2	Q96IV6	333 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	NT5C1A	Q9BXI3	368 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	SEMA4A	Q9H3S1	761 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	EBF3	Q9H4W6	596 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	CSNK1G1	Q9HCP0	422 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	KRT82	Q9NSB4	513 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	RAB20	Q9NX57	234 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	IL37	Q9NZH6	218 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223		R4GN57	208 aa		13.16	□□□□□ -0.3
STRN4-223	ENST00000602223	FAM92A	A1XBS5	289 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	CILP	O75339	1184 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	BEST1	O76090	585 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	ARSA	P15289	507 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	CD44	P16070	742 aa	Known RBP	13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	TRIM21	P19474	475 aa	Known RBP	13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	BMP6	P22004	513 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	YWHAQ	P27348	245 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	SLC5A3	P53794	718 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	SLC7A9	P82251	487 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	ZXDB	P98169	803 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	CSTF1	Q05048	431 aa	Known RBP	13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	IFRD2	Q12894	506 aa	Predicted RBP	13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	GAS6	Q14393	721 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	PON2	Q15165	354 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	CBWD6	Q4V339	395 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	DCAF17	Q5H9S7	520 aa	Predicted RBP	13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	CBWD3	Q5JTY5	395 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	DGKK	Q5KSL6	1271 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	CBWD5	Q5RIA9	395 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	ISM2	Q6H9L7	571 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	C12orf29	Q8N999	325 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	PDZD8	Q8NEN9	1154 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	SH3RF2	Q8TEC5	729 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	WHAMM	Q8TF30	809 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	OSCP1	Q8WVF1	389 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	NELL1	Q92832	810 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	FBXO32	Q969P5	355 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	SMO	Q99835	787 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	RNF38	Q9H0F5	515 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	RBM12	Q9NTZ6	932 aa	Known RBP	13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	FAM49B	Q9NUQ9	324 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	COMMD8	Q9NX08	183 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	DUS2	Q9NX74	493 aa	Known RBP	13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	COQ4	Q9Y3A0	265 aa		13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	MYO18A	Q92614	2054 aa	Known RBP	13.15	□□□□□ -0.3
STRN4-223	ENST00000602223	SPAG17	Q6Q759	2223 aa		13.15	□□□□□ -0.31
STRN4-223	ENST00000602223	OTOGL	Q3ZCN5	2332 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	LEFTY2	O00292	366 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	ABL1	P00519	1130 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	CD58	P19256	250 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	IFNAR2	P48551	515 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	CCIN	Q13939	588 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	MORC3	Q14149	939 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	EML3	Q32P44	896 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	TCERG1L	Q5VWI1	586 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	SNX30	Q5VWJ9	437 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	FOXR2	Q6PJQ5	311 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	KIAA1958	Q8N8K9	716 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	SCAMP5	Q8TAC9	235 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	CYFIP2	Q96F07	1278 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	CEP63	Q96MT8	703 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	HNRNPAB	Q99729	332 aa	Known RBP	13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	ECT2	Q9H8V3	914 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	CHMP5	Q9NZZ3	219 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	ARMCX3	Q9UH62	379 aa	Predicted RBP	13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	WNT6	Q9Y6F9	365 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	EML5	Q05BV3	1969 aa		13.14	□□□□□ -0.31
STRN4-223	ENST00000602223	CFAP54	Q96N23	3096 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	PPP1R3G	B7ZBB8	358 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	TRDMT1	O14717	391 aa	Known RBP	13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	ZDHHC11B	P0C7U3	371 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	FAM200B	P0CF97	657 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	TDGF1	P13385	188 aa		13.13	□□□□□ -0.31
STRN4-223	ENST00000602223	ADORA2B	P29275	332 aa		13.13	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms