RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TAF10Q12962 218 aa16.79■□□□□ 0.28
VRK3-221ENST00000600284 ADAM9Q13443 819 aa16.79■□□□□ 0.28
VRK3-221ENST00000600284 C1orf220Q5T0J3 134 aa16.79■□□□□ 0.28
VRK3-221ENST00000600284 FAM35AQ86V20 835 aa16.79■□□□□ 0.28
VRK3-221ENST00000600284 DCLK2Q8N568 766 aa16.79■□□□□ 0.28
VRK3-221ENST00000600284 SMARCD1Q96GM5 515 aa16.79■□□□□ 0.28
VRK3-221ENST00000600284 P2RY13Q9BPV8 354 aa16.79■□□□□ 0.28
VRK3-221ENST00000600284 SDCBP2Q9H190 292 aa16.79■□□□□ 0.28
VRK3-221ENST00000600284 TMEM30AQ9NV96 361 aa16.79■□□□□ 0.28
VRK3-221ENST00000600284 IL37Q9NZH6 218 aa16.79■□□□□ 0.28
VRK3-221ENST00000600284 RAB23Q9ULC3 237 aa16.79■□□□□ 0.28
VRK3-221ENST00000600284 ANAPC1Q9H1A4 1944 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 ZNF292O60281 2723 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 CCDC163A0A0D9SF12 145 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 LEFTY2O00292 366 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 NFATC1O95644 943 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 KRT13P13646 458 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 PSMC2P35998 433 aaKnown RBP16.78■□□□□ 0.28
VRK3-221ENST00000600284 RAP1GAPP47736 663 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 EDRF1Q3B7T1 1238 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 SNX30Q5VWJ9 437 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 PAQR9Q6ZVX9 377 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 ERMP1Q7Z2K6 904 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 DDX42Q86XP3 938 aaKnown RBP eCLIP16.78■□□□□ 0.28
VRK3-221ENST00000600284 CCDC26Q8TAB7 109 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 KCNK16Q96T55 309 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 MED10Q9BTT4 135 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 IMPG2Q9BZV3 1241 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 RNF38Q9H0F5 515 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 DMAP1Q9NPF5 467 aaPredicted RBP16.78■□□□□ 0.28
VRK3-221ENST00000600284 GMEB2Q9UKD1 530 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 WNT6Q9Y6F9 365 aa16.78■□□□□ 0.28
VRK3-221ENST00000600284 FAM92AA1XBS5 289 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 SLC9A3R1O14745 358 aaPredicted RBP16.77■□□□□ 0.28
VRK3-221ENST00000600284 TNFRSF10BO14763 440 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 HLA-DRAP01903 254 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 GTF2H1P32780 548 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 PIK3CAP42336 1068 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 ASPAP45381 313 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 FNTBP49356 437 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 NDST1P52848 882 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 NUCB2P80303 420 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 ZXDBP98169 803 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 ZCWPW2Q504Y3 356 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 LAIR1Q6GTX8 287 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 SCARA5Q6ZMJ2 495 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 ACOT1Q86TX2 421 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 WDR5BQ86VZ2 330 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 FAM186BQ8IYM0 893 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 FUKQ8N0W3 1084 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 TTC16Q8NEE8 873 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 CD101Q93033 1021 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 FAXDC2Q96IV6 333 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 LINC00597Q9H2U6 94 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 CYP3A43Q9HB55 503 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 GDPD2Q9HCC8 539 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 FBRSL1Q9HCM7 1045 aaKnown RBP16.77■□□□□ 0.28
VRK3-221ENST00000600284 CSNK1G1Q9HCP0 422 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 RMND1Q9NWS8 449 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 MAPK8IP1Q9UQF2 711 aa16.77■□□□□ 0.28
VRK3-221ENST00000600284 HRO43593 1189 aa16.76■□□□□ 0.27
VRK3-221ENST00000600284 AP1G2O75843 785 aa16.76■□□□□ 0.27
VRK3-221ENST00000600284 ABL1P00519 1130 aa16.76■□□□□ 0.27
VRK3-221ENST00000600284 EGFP01133 1207 aa16.76■□□□□ 0.27
VRK3-221ENST00000600284 TUBP50607 506 aa16.76■□□□□ 0.27
VRK3-221ENST00000600284 INCA1Q0VD86 236 aa16.76■□□□□ 0.27
VRK3-221ENST00000600284 SIM2Q14190 667 aaPredicted RBP16.76■□□□□ 0.27
VRK3-221ENST00000600284 ADGRG2Q8IZP9 1017 aa16.76■□□□□ 0.27
VRK3-221ENST00000600284 FMR1NBQ8N0W7 255 aaPredicted RBP16.76■□□□□ 0.27
VRK3-221ENST00000600284 CAMKK1Q8N5S9 505 aa16.76■□□□□ 0.27
VRK3-221ENST00000600284 FBXO32Q969P5 355 aa16.76■□□□□ 0.27
VRK3-221ENST00000600284 GTPBP4Q9BZE4 634 aaKnown RBP16.76■□□□□ 0.27
VRK3-221ENST00000600284 DNAI2Q9GZS0 605 aa16.76■□□□□ 0.27
VRK3-221ENST00000600284 C2orf42Q9NWW7 574 aa16.76■□□□□ 0.27
VRK3-221ENST00000600284 SLC8A2Q9UPR5 921 aa16.76■□□□□ 0.27
VRK3-221ENST00000600284 CPQQ9Y646 472 aa16.76■□□□□ 0.27
VRK3-221ENST00000600284 GPR179Q6PRD1 2367 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 GOLGA6L4A6NEF3 574 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 LRP3O75074 770 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 RNF40O75150 1001 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 RETP07949 1114 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 ZDHHC11BP0C7U3 371 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 SDHBP21912 280 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 GCLMP48507 274 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 SLC5A3P53794 718 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 PPP3CAQ08209 521 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 DMWDQ09019 674 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 IFRD2Q12894 506 aaPredicted RBP16.75■□□□□ 0.27
VRK3-221ENST00000600284 COBLL1Q53SF7 1204 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 HECTD3Q5T447 861 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 SPOPLQ6IQ16 392 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 CCDC150Q8NCX0 1101 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 ELMO3Q96BJ8 720 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 GSDMAQ96QA5 445 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 DUSP9Q99956 384 aaKnown RBP16.75■□□□□ 0.27
VRK3-221ENST00000600284 FBXO44Q9H4M3 255 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 TMEM8AQ9HCN3 771 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 TBC1D14Q9P2M4 693 aa16.75■□□□□ 0.27
VRK3-221ENST00000600284 SPTBN4Q9H254 2564 aa16.74■□□□□ 0.27
VRK3-221ENST00000600284 E2F8A0AVK6 867 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms