RNA–Protein interactions for RNA: ENST00000600244.5

SSBP4-207, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-207ENST00000600244 KDSRQ06136 332 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 ST3GAL1Q11201 340 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 JADE1Q6IE81 842 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 TRMT11Q7Z4G4 463 aaKnown RBP18.92■□□□□ 0.62
SSBP4-207ENST00000600244 ZNF513Q8N8E2 541 aaPredicted RBP18.92■□□□□ 0.62
SSBP4-207ENST00000600244 FSIP1Q8NA03 581 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 TMEM161BQ8NDZ6 487 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 SPIRE2Q8WWL2 714 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 DRC1Q96MC2 740 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 PYM1Q9BRP8 204 aaKnown RBP18.92■□□□□ 0.62
SSBP4-207ENST00000600244 ABCB6Q9NP58 842 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 CD93Q9NPY3 652 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 KIAA1024Q9UPX6 916 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 BTBD3Q9Y2F9 522 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 NFE2L3Q9Y4A8 694 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 PIEZO2Q9H5I5 2752 aa18.92■□□□□ 0.62
SSBP4-207ENST00000600244 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.91■□□□□ 0.62
SSBP4-207ENST00000600244 BTBD18B2RXH4 712 aa18.91■□□□□ 0.62
SSBP4-207ENST00000600244 RRP8O43159 456 aaKnown RBP18.91■□□□□ 0.62
SSBP4-207ENST00000600244 TNFSF14O43557 240 aa18.91■□□□□ 0.62
SSBP4-207ENST00000600244 NDUFS2O75306 463 aa18.91■□□□□ 0.62
SSBP4-207ENST00000600244 CER1O95813 267 aa18.91■□□□□ 0.62
SSBP4-207ENST00000600244 MAPTP10636 758 aaKnown RBP18.91■□□□□ 0.62
SSBP4-207ENST00000600244 PFKLP17858 780 aa18.91■□□□□ 0.62
SSBP4-207ENST00000600244 MATKP42679 507 aa18.91■□□□□ 0.62
SSBP4-207ENST00000600244 KYAT1Q16773 422 aa18.91■□□□□ 0.62
SSBP4-207ENST00000600244 HLA-BQ31612 363 aa18.91■□□□□ 0.62
SSBP4-207ENST00000600244 TMPRSS12Q86WS5 348 aa18.91■□□□□ 0.62
SSBP4-207ENST00000600244 GTF3C6Q969F1 213 aa18.91■□□□□ 0.62
SSBP4-207ENST00000600244 NXPE2Q96DL1 559 aa18.91■□□□□ 0.62
SSBP4-207ENST00000600244 ZSCAN31Q96LW9 406 aaPredicted RBP18.91■□□□□ 0.62
SSBP4-207ENST00000600244 BRMS1Q9HCU9 246 aa18.91■□□□□ 0.62
SSBP4-207ENST00000600244 DNMT3LQ9UJW3 386 aa18.91■□□□□ 0.62
SSBP4-207ENST00000600244 TBC1D3BA6NDS4 549 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 SFI1A8K8P3 1242 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 PYCARD-AS1I3L0S3 204 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 ERVH48-1M5A8F1 160 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 SLC9A3R1O14745 358 aaPredicted RBP18.9■□□□□ 0.62
SSBP4-207ENST00000600244 NTSR1P30989 418 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 MCM7P33993 719 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 CCT6AP40227 531 aaKnown RBP18.9■□□□□ 0.62
SSBP4-207ENST00000600244 PDE6CP51160 858 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 MYO1EQ12965 1108 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 HAUS3Q68CZ6 603 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 IL27RAQ6UWB1 636 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 DHRS13Q6UX07 377 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 MIB1Q86YT6 1006 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 ETFBKMTQ8IXQ9 262 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 IPO4Q8TEX9 1081 aaKnown RBP18.9■□□□□ 0.62
SSBP4-207ENST00000600244 SNX21Q969T3 373 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 WBP1Q96G27 269 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 RUSC1Q9BVN2 902 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 RPF1Q9H9Y2 349 aaKnown RBP18.9■□□□□ 0.62
SSBP4-207ENST00000600244 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.9■□□□□ 0.62
SSBP4-207ENST00000600244 STARD13Q9Y3M8 1113 aa18.9■□□□□ 0.62
SSBP4-207ENST00000600244 B8ZZF3 427 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 WISP1O95388 367 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 CTDNEP1O95476 244 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 ADH1CP00326 375 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 ADH5P11766 374 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 WASP42768 502 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 MATR3P43243 847 aaKnown RBP eCLIP18.89■□□□□ 0.61
SSBP4-207ENST00000600244 TAF6P49848 677 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 SLC7A9P82251 487 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 TSPY1Q01534 308 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 RINT1Q6NUQ1 792 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 C1orf186Q6ZWK4 172 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 CD302Q8IX05 232 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 ZCCHC9Q8N567 271 aaKnown RBP18.89■□□□□ 0.61
SSBP4-207ENST00000600244 NECAB1Q8N987 351 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 FAM181AQ8N9Y4 354 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 SNIP1Q8TAD8 396 aaKnown RBP18.89■□□□□ 0.61
SSBP4-207ENST00000600244 PKMYT1Q99640 499 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 RNF38Q9H0F5 515 aa18.89■□□□□ 0.61
SSBP4-207ENST00000600244 DDX19AQ9NUU7 478 aaKnown RBP18.89■□□□□ 0.61
SSBP4-207ENST00000600244 ORC3Q9UBD5 711 aaPredicted RBP18.89■□□□□ 0.61
SSBP4-207ENST00000600244 ZBTB24O43167 697 aaPredicted RBP18.88■□□□□ 0.61
SSBP4-207ENST00000600244 FDPSP14324 419 aaKnown RBP18.88■□□□□ 0.61
SSBP4-207ENST00000600244 CDC25AP30304 524 aa18.88■□□□□ 0.61
SSBP4-207ENST00000600244 SEMG2Q02383 582 aa18.88■□□□□ 0.61
SSBP4-207ENST00000600244 TMX3Q96JJ7 454 aa18.88■□□□□ 0.61
SSBP4-207ENST00000600244 DACH1Q9UI36 760 aa18.88■□□□□ 0.61
SSBP4-207ENST00000600244 DERAQ9Y315 318 aa18.88■□□□□ 0.61
SSBP4-207ENST00000600244 E9PMD0 336 aa18.87■□□□□ 0.61
SSBP4-207ENST00000600244 SCAMP3O14828 347 aaKnown RBP18.87■□□□□ 0.61
SSBP4-207ENST00000600244 OGTO15294 1046 aa18.87■□□□□ 0.61
SSBP4-207ENST00000600244 OLFM2O95897 454 aa18.87■□□□□ 0.61
SSBP4-207ENST00000600244 TLE3Q04726 772 aa18.87■□□□□ 0.61
SSBP4-207ENST00000600244 PDIA5Q14554 519 aa18.87■□□□□ 0.61
SSBP4-207ENST00000600244 TMEM132DQ14C87 1099 aa18.87■□□□□ 0.61
SSBP4-207ENST00000600244 SUZ12Q15022 739 aaKnown RBP18.87■□□□□ 0.61
SSBP4-207ENST00000600244 LY6G5CQ5SRR4 150 aa18.87■□□□□ 0.61
SSBP4-207ENST00000600244 C1orf216Q8TAB5 229 aa18.87■□□□□ 0.61
SSBP4-207ENST00000600244 BAP1Q92560 729 aa18.87■□□□□ 0.61
SSBP4-207ENST00000600244 FAM212AQ96EL1 285 aa18.87■□□□□ 0.61
SSBP4-207ENST00000600244 MRGPRX1Q96LB2 322 aa18.87■□□□□ 0.61
SSBP4-207ENST00000600244 ACOX2Q99424 681 aa18.87■□□□□ 0.61
SSBP4-207ENST00000600244 ACBD6Q9BR61 282 aa18.87■□□□□ 0.61
SSBP4-207ENST00000600244 SEMA4CQ9C0C4 833 aa18.87■□□□□ 0.61
SSBP4-207ENST00000600244 KCNG1Q9UIX4 513 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms