RNA–Protein interactions for RNA: ENST00000599687.1

SNRNP70-208, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-208ENST00000599687 SLCO4C1Q6ZQN7 724 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 C1orf229Q6ZS94 237 aaPredicted RBP9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 LHFPL2Q6ZUX7 228 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 GPR149Q86SP6 731 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 CEP57Q86XR8 500 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 PALB2Q86YC2 1186 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 LINC00301Q8NCQ3 95 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 RIN3Q8TB24 985 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 LNX1Q8TBB1 728 aaPredicted RBP9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 HDAC7Q8WUI4 952 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 ELMO3Q96BJ8 720 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 SNX27Q96L92 541 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 UROC1Q96N76 676 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 KRTAP4-12Q9BQ66 201 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 TTPALQ9BTX7 342 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 PANK2Q9BZ23 570 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 NRSN2Q9GZP1 204 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 ZHX3Q9H4I2 956 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 SFXN1Q9H9B4 322 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 PARVGQ9HBI0 331 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 GOLGA2P5Q9HBQ8 144 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 ANKFY1Q9P2R3 1169 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 SUSD2Q9UGT4 822 aa9.47□□□□□ -0.89
SNRNP70-208ENST00000599687 SF3B1O75533 1304 aaKnown RBP eCLIP9.47□□□□□ -0.894e-6■■■■■ 48.8
SNRNP70-208ENST00000599687 MTCL1Q9Y4B5 1905 aaKnown RBP9.46□□□□□ -0.89
SNRNP70-208ENST00000599687 VCANP13611 3396 aa9.46□□□□□ -0.89
SNRNP70-208ENST00000599687 PRAMEF27A3QJZ7 478 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 MYMKA6NI61 221 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 PRR33A8MZF0 331 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 K7ENM7 598 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 SPTLC2O15270 562 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 TGM5O43548 720 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 SIN3BO75182 1162 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 TBCAO75347 108 aaKnown RBP9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 B3GAT3O94766 335 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 RASGRP1O95267 797 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 GLUD1P00367 558 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 PIGRP01833 764 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 SPATA31D3P0C874 917 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 HARSP12081 509 aaKnown RBP9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 NMT1P30419 496 aaKnown RBP9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 LIG4P49917 911 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 CREMQ03060 361 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 BIRC2Q13490 618 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 NOLC1Q14978 699 aaKnown RBP eCLIP9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 STK38Q15208 465 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 ZC2HC1CQ53FD0 456 aaPredicted RBP9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 SPATA31D4Q6ZUB0 917 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 DYMQ7RTS9 669 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 CMASQ8NFW8 434 aaPredicted RBP9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 LEO1Q8WVC0 666 aaPredicted RBP9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 EDAQ92838 391 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 BICD1Q96G01 975 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 ZNF396Q96N95 335 aaPredicted RBP9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 CLSTN3Q9BQT9 956 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 LGR4Q9BXB1 951 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 ST6GALNAC4Q9H4F1 302 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 PLEKHA4Q9H4M7 779 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 SOX17Q9H6I2 414 aaPredicted RBP9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 ZFP64Q9NPA5 681 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 MAN1C1Q9NR34 630 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 KRT82Q9NSB4 513 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 SLC38A7Q9NVC3 462 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 DPP7Q9UHL4 492 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 NR2E1Q9Y466 385 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 VWA8A3KMH1 1905 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 CITO14578 2027 aa9.46□□□□□ -0.9
SNRNP70-208ENST00000599687 BDP1A6H8Y1 2624 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 PDCD11Q14690 1871 aaKnown RBP9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 DENND4AQ7Z401 1863 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 C2orf16Q68DN1 1984 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 CCDC195A0A1B0GUA6 201 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 TTC26A0AVF1 554 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 C2CD4DB7Z1M9 353 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 ANKRD63C9JTQ0 380 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 ADAM12O43184 909 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 TRAPPC3O43617 180 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 FAM189A1O60320 539 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 PPP6R2O75170 966 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 RFPL2O75678 378 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 PAPLNO95428 1278 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 PGRP06401 933 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 HSP90AA1P07900 732 aaKnown RBP9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 CLTAP09496 248 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 ZSCAN22P10073 491 aaPredicted RBP9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 MYBP10242 640 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 ARAFP10398 606 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 SP100P23497 879 aaPredicted RBP9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 RPL9P32969 192 aaKnown RBP9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 ABCD1P33897 745 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 TNFSF9P41273 254 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 MATR3P43243 847 aaKnown RBP eCLIP9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 GATA4P43694 442 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 BRCC3P46736 316 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 POU4F3Q15319 338 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 ZBTB6Q15916 424 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 PSMD5Q16401 504 aa9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 TDRD10Q5VZ19 366 aaKnown RBP9.45□□□□□ -0.9
SNRNP70-208ENST00000599687 SLC39A4Q6P5W5 647 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms