RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 ZNF840PA6NDX5 716 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 CYP26A1O43174 497 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 FGF19O95750 216 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 UCHL3P15374 230 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 YWHAQP27348 245 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 ZXDAP98168 799 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 UBXN1Q04323 297 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 DRAP1Q14919 205 aaPredicted RBP15.02■□□□□ -0
SHKBP1-217ENST00000598558 IER5LQ5T953 404 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 DENND1BQ6P3S1 775 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 PIGZQ86VD9 579 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 MON1AQ86VX9 555 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 ARID3BQ8IVW6 561 aaPredicted RBP15.02■□□□□ -0
SHKBP1-217ENST00000598558 FAM71AQ8IYT1 594 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 NDRG1Q92597 394 aaKnown RBP15.02■□□□□ -0
SHKBP1-217ENST00000598558 SMARCD2Q92925 531 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 ERGIC2Q96RQ1 377 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 TRPV4Q9HBA0 871 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 OSER1Q9NX31 292 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 GMIPQ9P107 970 aa15.02■□□□□ -0
SHKBP1-217ENST00000598558 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.02■□□□□ -0
SHKBP1-217ENST00000598558 MUC3AQ02505 3323 aa15.02□□□□□ -0.01
SHKBP1-217ENST00000598558 DCXO43602 365 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 ZDHHC11BP0C7U3 371 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 USP8P40818 1118 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 KIF11P52732 1056 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 ZXDBP98169 803 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 TDGQ13569 410 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 RAB41Q5JT25 222 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 FKBP15Q5T1M5 1219 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 VITQ6UXI7 678 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 SCD5Q86SK9 330 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 ARL14EPQ8N8R7 260 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 SLC35F5Q8WV83 523 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 ZNF606Q8WXB4 792 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 FBXO32Q969P5 355 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 UBXN6Q9BZV1 441 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 RNF38Q9H0F5 515 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 SLITRK6Q9H5Y7 841 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 NMUR1Q9HB89 426 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 FAM207AQ9NSI2 230 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 IGSF9Q9P2J2 1179 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 UXTQ9UBK9 157 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 CYTH4Q9UIA0 394 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 SORCS3Q9UPU3 1222 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 CCL26Q9Y258 94 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 USP3Q9Y6I4 520 aa15.01□□□□□ -0.01
SHKBP1-217ENST00000598558 BDP1A6H8Y1 2624 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 PTPRDP23468 1912 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 A0A1B0GTH6 734 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 ECI2O75521 394 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 RTN3O95197 1032 aaPredicted RBP15□□□□□ -0.01
SHKBP1-217ENST00000598558 POLR2FP61218 127 aaKnown RBP15□□□□□ -0.01
SHKBP1-217ENST00000598558 GPC5P78333 572 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 FANCCQ00597 558 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 RAPGEF1Q13905 1077 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 NR1I3Q14994 352 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 ARHGAP15Q53QZ3 475 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 PMF1Q6P1K2 205 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 BHLHA9Q7RTU4 235 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 SLC47A2Q86VL8 602 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 CMTM8Q8IZV2 173 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 WDTC1Q8N5D0 677 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 ANKRD20A12PQ8NF67 263 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 MRPS31Q92665 395 aaKnown RBP15□□□□□ -0.01
SHKBP1-217ENST00000598558 EDAQ92838 391 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 USP13Q92995 863 aaPredicted RBP15□□□□□ -0.01
SHKBP1-217ENST00000598558 SECISBP2LQ93073 1101 aaKnown RBP15□□□□□ -0.01
SHKBP1-217ENST00000598558 ELSPBP1Q96BH3 223 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 STK33Q9BYT3 514 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 TSPY26PQ9H489 355 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 TRPC7Q9HCX4 862 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 PNPLA8Q9NP80 782 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 NLRC4Q9NPP4 1024 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 C11orf16Q9NQ32 467 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 TRPM5Q9NZQ8 1165 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 DOCK8Q8NF50 2099 aa15□□□□□ -0.01
SHKBP1-217ENST00000598558 HEPACAM2A8MVW5 462 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 XPO1O14980 1071 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 TPM2P07951 284 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 TRIM21P19474 475 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 WEE1P30291 646 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 GNA15P30679 374 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 GPD2P43304 727 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 RGS7P49802 495 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 BCAT1P54687 386 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 JAM2P57087 298 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 ZNF445P59923 1031 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 BST2Q10589 180 aaKnown RBP14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 GRM2Q14416 872 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 NXPE3Q969Y0 559 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 FAM81BQ96LP2 452 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 GCNAQ96QF7 691 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 CCSER2Q9H7U1 834 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 ZFP14Q9HCL3 533 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 COMMD8Q9NX08 183 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 HESX1Q9UBX0 185 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 SCML2Q9UQR0 700 aa14.99□□□□□ -0.01
SHKBP1-217ENST00000598558 A0A1W2PQH9 124 aa14.98□□□□□ -0.01
SHKBP1-217ENST00000598558 F8VZ95 297 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms