RNA–Protein interactions for RNA: ENST00000597776.1

LSM4-205, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 2

Gene LSM4, Length 446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM4-205	ENST00000597776	EPG5	Q9HCE0	2579 aa		11.22	□□□□□ -0.61
LSM4-205	ENST00000597776		A8MXQ7	604 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776		K7EQS6	105 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	FOXD2	O60548	495 aa	Predicted RBP	11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	CLSTN1	O94985	981 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	OLFM2	O95897	454 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	OAS1	P00973	400 aa	Known RBP	11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	CYP17A1	P05093	508 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	ME1	P48163	572 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	PDE6C	P51160	858 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	DGKE	P52429	567 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	CDH8	P55286	799 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	SLC7A9	P82251	487 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	MESP2	Q0VG99	397 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	TRPC3	Q13507	836 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	BMT2	Q1RMZ1	405 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	C2orf27A	Q580R0	203 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	PLA2G2C	Q5R387	149 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	TDRD10	Q5VZ19	366 aa	Known RBP	11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	IL31	Q6EBC2	164 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	SCARA5	Q6ZMJ2	495 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	CCDC33	Q8N5R6	958 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	USP33	Q8TEY7	942 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	ZC3H10	Q96K80	434 aa	Known RBP	11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	CEP295NL	Q96MC4	621 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	TPSD1	Q9BZJ3	242 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	ELOVL4	Q9GZR5	314 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	DUSP15	Q9H1R2	295 aa	Predicted RBP	11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	MAGEF1	Q9HAY2	307 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	CFAP97	Q9P2B7	532 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	PCDHA7	Q9UN72	937 aa		11.21	□□□□□ -0.61
LSM4-205	ENST00000597776	ACACB	O00763	2458 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	SPAG17	Q6Q759	2223 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	EXOC3	O60645	756 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	PHACTR2	O75167	634 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	STAU1	O95793	577 aa	Known RBP	11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	ZSCAN22	P10073	491 aa	Predicted RBP	11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	PFKL	P17858	780 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	GBP1	P32455	592 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	SLC6A11	P48066	632 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	LIMK1	P53667	647 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	SNRPF	P62306	86 aa	Known RBP	11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	BIRC3	Q13489	604 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	PKP1	Q13835	747 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	DHCR24	Q15392	516 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	ELF2	Q15723	593 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	KNOP1	Q1ED39	458 aa	Known RBP	11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	STPG1	Q5TH74	334 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	RESP18	Q5W5W9	173 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	ANO7	Q6IWH7	933 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	C12orf40	Q86WS4	652 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	C12orf56	Q8IXR9	622 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	TSTD1	Q8NFU3	115 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	SYAP1	Q96A49	352 aa	Predicted RBP	11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	SLITRK1	Q96PX8	696 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	KCNK16	Q96T55	309 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	SDCBP2	Q9H190	292 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	EHD2	Q9NZN4	543 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	EBF1	Q9UH73	591 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	PCDHGA5	Q9Y5G8	931 aa		11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	TPR	P12270	2363 aa	Known RBP	11.2	□□□□□ -0.62
LSM4-205	ENST00000597776	LRRIQ3	A6PVS8	624 aa	Predicted RBP	11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	TM4SF5	O14894	197 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	COCH	O43405	550 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	KRT37	O76014	449 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	F13A1	P00488	732 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	MBL2	P11226	248 aa	Predicted RBP	11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	HNRNPL	P14866	589 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	YWHAQ	P27348	245 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	ATIC	P31939	592 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	PPP3CC	P48454	512 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	CREB5	Q02930	508 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	KDSR	Q06136	332 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	ORC1	Q13415	861 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	NCOA4	Q13772	614 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	ZNF699	Q32M78	642 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	RHBDF2	Q6PJF5	856 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	FAM35A	Q86V20	835 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	TTC30A	Q86WT1	665 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	ADGRG2	Q8IZP9	1017 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	NUP93	Q8N1F7	819 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	KIAA0895	Q8NCT3	520 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	SCAMP5	Q8TAC9	235 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	FBXO32	Q969P5	355 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	ZFR	Q96KR1	1074 aa	Known RBP	11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	MED10	Q9BTT4	135 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	ZDHHC4	Q9NPG8	344 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	VPS45	Q9NRW7	570 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	FAM13B	Q9NYF5	915 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	CGN	Q9P2M7	1197 aa	Known RBP	11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	SERTAD1	Q9UHV2	236 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	MMP17	Q9ULZ9	603 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	CHD8	Q9HCK8	2581 aa		11.19	□□□□□ -0.62
LSM4-205	ENST00000597776	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.18	□□□□□ -0.62
LSM4-205	ENST00000597776	PVALEF	A0A1B0GWK0	134 aa		11.18	□□□□□ -0.62
LSM4-205	ENST00000597776	BCLAF3	A2AJT9	711 aa	Known RBP	11.18	□□□□□ -0.62
LSM4-205	ENST00000597776	SLC9A3R1	O14745	358 aa	Predicted RBP	11.18	□□□□□ -0.62
LSM4-205	ENST00000597776	ACTN4	O43707	911 aa	Known RBP	11.18	□□□□□ -0.62
LSM4-205	ENST00000597776	KLRC4	O43908	158 aa		11.18	□□□□□ -0.62
LSM4-205	ENST00000597776	RHOBTB1	O94844	696 aa		11.18	□□□□□ -0.62

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