RNA–Protein interactions for RNA: ENST00000596379.1

LINC02560-201, Transcript of long intergenic non-protein coding RNA 2560, humanhuman

BASIC

Gene LINC02560, Length 459 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02560-201ENST00000596379 CPQQ9Y646 472 aa16.97■□□□□ 0.31
LINC02560-201ENST00000596379 NUP205Q92621 2012 aa16.97■□□□□ 0.31
LINC02560-201ENST00000596379 KMT2BQ9UMN6 2715 aaPredicted RBP16.96■□□□□ 0.31
LINC02560-201ENST00000596379 SCAMP3O14828 347 aaKnown RBP16.96■□□□□ 0.31
LINC02560-201ENST00000596379 CAVIN2O95810 425 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 CYP17A1P05093 508 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 SLC6A11P48066 632 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 CACNA2D1P54289 1103 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 MYL6P60660 151 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 TNNC1P63316 161 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 TRPC3Q13507 836 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 USP39Q53GS9 565 aaKnown RBP16.96■□□□□ 0.31
LINC02560-201ENST00000596379 TDRD10Q5VZ19 366 aaKnown RBP16.96■□□□□ 0.31
LINC02560-201ENST00000596379 RNF43Q68DV7 783 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 CNNM4Q6P4Q7 775 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 SHC4Q6S5L8 630 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 CCDC33Q8N5R6 958 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 SCFD1Q8WVM8 642 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 ZNF396Q96N95 335 aaPredicted RBP16.96■□□□□ 0.31
LINC02560-201ENST00000596379 LSM14BQ9BX40 385 aaKnown RBP16.96■□□□□ 0.31
LINC02560-201ENST00000596379 B3GNT5Q9BYG0 378 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 TPSD1Q9BZJ3 242 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 ZNF518BQ9C0D4 1074 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 TMEM30AQ9NV96 361 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 CHD8Q9HCK8 2581 aa16.96■□□□□ 0.31
LINC02560-201ENST00000596379 BCLAF3A2AJT9 711 aaKnown RBP16.95■□□□□ 0.3
LINC02560-201ENST00000596379 A8MXQ7 604 aa16.95■□□□□ 0.3
LINC02560-201ENST00000596379 CLDN5O00501 218 aa16.95■□□□□ 0.3
LINC02560-201ENST00000596379 CUTAO60888 179 aa16.95■□□□□ 0.3
LINC02560-201ENST00000596379 OLFM2O95897 454 aa16.95■□□□□ 0.3
LINC02560-201ENST00000596379 OAS1P00973 400 aaKnown RBP16.95■□□□□ 0.3
LINC02560-201ENST00000596379 CASP1P29466 404 aa16.95■□□□□ 0.3
LINC02560-201ENST00000596379 SNRPFP62306 86 aaKnown RBP16.95■□□□□ 0.3
LINC02560-201ENST00000596379 IFRD2Q12894 506 aaPredicted RBP16.95■□□□□ 0.3
LINC02560-201ENST00000596379 DHCR24Q15392 516 aa16.95■□□□□ 0.3
LINC02560-201ENST00000596379 ST3GAL2Q16842 350 aa16.95■□□□□ 0.3
LINC02560-201ENST00000596379 ANO7Q6IWH7 933 aa16.95■□□□□ 0.3
LINC02560-201ENST00000596379 UNC13DQ70J99 1090 aa16.95■□□□□ 0.3
LINC02560-201ENST00000596379 KIAA1958Q8N8K9 716 aa16.95■□□□□ 0.3
LINC02560-201ENST00000596379 SLITRK1Q96PX8 696 aa16.95■□□□□ 0.3
LINC02560-201ENST00000596379 ELOVL4Q9GZR5 314 aa16.95■□□□□ 0.3
LINC02560-201ENST00000596379 GZF1Q9H116 711 aaPredicted RBP16.95■□□□□ 0.3
LINC02560-201ENST00000596379 CFAP97Q9P2B7 532 aa16.95■□□□□ 0.3
LINC02560-201ENST00000596379 NXF1Q9UBU9 619 aaKnown RBP16.95■□□□□ 0.3
LINC02560-201ENST00000596379 MMP17Q9ULZ9 603 aa16.95■□□□□ 0.3
LINC02560-201ENST00000596379 K7ELQ4 463 aaPredicted RBP16.94■□□□□ 0.3
LINC02560-201ENST00000596379 SLC9A3R1O14745 358 aaPredicted RBP16.94■□□□□ 0.3
LINC02560-201ENST00000596379 KCNK5O95279 499 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 MBL2P11226 248 aaPredicted RBP16.94■□□□□ 0.3
LINC02560-201ENST00000596379 PMLP29590 882 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 MRPS21P82921 87 aaKnown RBP16.94■□□□□ 0.3
LINC02560-201ENST00000596379 EHHADHQ08426 723 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 CRY1Q16526 586 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 RHBDF2Q6PJF5 856 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 RASSF3Q86WH2 238 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 TTC30AQ86WT1 665 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 SFTPA1Q8IWL2 248 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 NUP93Q8N1F7 819 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 B3GALNT2Q8NCR0 500 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 CNOT6LQ96LI5 555 aaKnown RBP16.94■□□□□ 0.3
LINC02560-201ENST00000596379 PNKPQ96T60 521 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 XYLT2Q9H1B5 865 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 BLZF1Q9H2G9 400 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 SLC39A2Q9NP94 309 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 ANGPTL2Q9UKU9 493 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 UBE4BO95155 1302 aa16.94■□□□□ 0.3
LINC02560-201ENST00000596379 MYO18AQ92614 2054 aaKnown RBP16.93■□□□□ 0.3
LINC02560-201ENST00000596379 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.93■□□□□ 0.3
LINC02560-201ENST00000596379 C4orf47A7E2U8 309 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 POLR2DO15514 142 aaKnown RBP16.93■□□□□ 0.3
LINC02560-201ENST00000596379 PHACTR2O75167 634 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 YEATS4O95619 227 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 STAU1O95793 577 aaKnown RBP16.93■□□□□ 0.3
LINC02560-201ENST00000596379 YWHAQP27348 245 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 ATICP31939 592 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 CASP4P49662 377 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 CDH8P55286 799 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 MESP2Q0VG99 397 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 FOXD4L5Q5VV16 416 aaPredicted RBP16.93■□□□□ 0.3
LINC02560-201ENST00000596379 PMS2CLQ68D20 193 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 TMEM92Q6UXU6 159 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 C11orf74Q86VG3 221 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 ALLCQ8N6M5 410 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 MDGA1Q8NFP4 955 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 FOXD4L4Q8WXT5 416 aaPredicted RBP16.93■□□□□ 0.3
LINC02560-201ENST00000596379 SYAP1Q96A49 352 aaPredicted RBP16.93■□□□□ 0.3
LINC02560-201ENST00000596379 KCNK16Q96T55 309 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 EDEM2Q9BV94 578 aa16.93■□□□□ 0.3
LINC02560-201ENST00000596379 CHORDC1Q9UHD1 332 aaPredicted RBP16.93■□□□□ 0.3
LINC02560-201ENST00000596379 A0A0A0MRY4 1105 aa16.92■□□□□ 0.3
LINC02560-201ENST00000596379 EXOC3O60645 756 aa16.92■□□□□ 0.3
LINC02560-201ENST00000596379 RTN3O95197 1032 aaPredicted RBP16.92■□□□□ 0.3
LINC02560-201ENST00000596379 KAT7O95251 611 aa16.92■□□□□ 0.3
LINC02560-201ENST00000596379 KLF8O95600 359 aaPredicted RBP16.92■□□□□ 0.3
LINC02560-201ENST00000596379 APODP05090 189 aa16.92■□□□□ 0.3
LINC02560-201ENST00000596379 HNRNPLP14866 589 aaKnown RBP eCLIP16.92■□□□□ 0.3
LINC02560-201ENST00000596379 BCKDHBP21953 392 aa16.92■□□□□ 0.3
LINC02560-201ENST00000596379 TIE1P35590 1138 aa16.92■□□□□ 0.3
LINC02560-201ENST00000596379 BMT2Q1RMZ1 405 aa16.92■□□□□ 0.3
LINC02560-201ENST00000596379 EMC10Q5UCC4 262 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms