RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 SMOQ99835 787 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 NT5C1AQ9BXI3 368 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 DMAP1Q9NPF5 467 aaPredicted RBP13.85□□□□□ -0.19
USE1-207ENST00000596136 GKN1Q9NS71 199 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 ARHGAP26Q9UNA1 814 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 MYH10P35580 1976 aa13.85□□□□□ -0.19
USE1-207ENST00000596136 BICDL2A1A5D9 508 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 BIN1O00499 593 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 AP1G2O75843 785 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 BEST1O76090 585 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 OAS1P00973 400 aaKnown RBP13.84□□□□□ -0.19
USE1-207ENST00000596136 ZDHHC11BP0C7U3 371 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 HDCP19113 662 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 YWHAQP27348 245 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 SLC7A9P82251 487 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 USP4Q13107 963 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 ORC1Q13415 861 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 ITPRIPL2Q3MIP1 535 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 WDR44Q5JSH3 913 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 TCERG1LQ5VWI1 586 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 MAML2Q8IZL2 1156 aaPredicted RBP13.84□□□□□ -0.19
USE1-207ENST00000596136 TATDN2Q93075 761 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 SLITRK1Q96PX8 696 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 MED10Q9BTT4 135 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 HPS4Q9NQG7 708 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.84□□□□□ -0.195e-8■■■■■ 188.3
USE1-207ENST00000596136 GTSE1Q9NYZ3 720 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 PATJQ8NI35 1801 aa13.84□□□□□ -0.19
USE1-207ENST00000596136 ZFHX2Q9C0A1 2572 aaPredicted RBP13.84□□□□□ -0.19
USE1-207ENST00000596136 HELZP42694 1942 aaKnown RBP13.84□□□□□ -0.19
USE1-207ENST00000596136 FANCMQ8IYD8 2048 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 RIF1Q5UIP0 2472 aaKnown RBP13.83□□□□□ -0.2
USE1-207ENST00000596136 SPECC1L-ADORA2AF8WAN1 911 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 CKMP06732 381 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 CHRNB1P11230 501 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 CCDC130P13994 396 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 TRIM21P19474 475 aaKnown RBP13.83□□□□□ -0.2
USE1-207ENST00000596136 CTHP32929 405 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 FMO5P49326 533 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 MRE11P49959 708 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 KPNA1P52294 538 aaPredicted RBP13.83□□□□□ -0.2
USE1-207ENST00000596136 ZXDBP98169 803 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 TNK2Q07912 1038 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 PAK1Q13153 545 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 RUNX3Q13761 415 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 PDGFRLQ15198 375 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 DCAF17Q5H9S7 520 aaPredicted RBP13.83□□□□□ -0.2
USE1-207ENST00000596136 KLHL10Q6JEL2 608 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 PDZD8Q8NEN9 1154 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 SCAMP5Q8TAC9 235 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 CYFIP2Q96F07 1278 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 IER2Q9BTL4 223 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 DNAI2Q9GZS0 605 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 RNF38Q9H0F5 515 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 CHRDQ9H2X0 955 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 TRPC7Q9HCX4 862 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 PNPLA8Q9NP80 782 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 KRT82Q9NSB4 513 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 CISHQ9NSE2 258 aa13.83□□□□□ -0.2
USE1-207ENST00000596136 OTOL1A6NHN0 477 aaPredicted RBP13.82□□□□□ -0.2
USE1-207ENST00000596136 HHLA1C9JL84 531 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 P4HA2O15460 535 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 GNA14O95837 355 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 CD58P19256 250 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 SOX9P48436 509 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 SLC5A3P53794 718 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 RAD23BP54727 409 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 MTF1Q14872 753 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 CAMK4Q16566 473 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 ZNF528Q3MIS6 628 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 TXNDC11Q6PKC3 985 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 CLEC20AQ6ZU45 233 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 ALYREFQ86V81 257 aaKnown RBP13.82□□□□□ -0.2
USE1-207ENST00000596136 TRIM59Q8IWR1 403 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 UBR7Q8N806 425 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 SLC4A11Q8NBS3 891 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 LMO3Q8TAP4 145 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 SH3RF2Q8TEC5 729 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 OSCP1Q8WVF1 389 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 CHFRQ96EP1 664 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 ARID3AQ99856 593 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 LMAN1LQ9HAT1 526 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 FAM49BQ9NUQ9 324 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 FAM86C1Q9NVL1 165 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 FBXO4Q9UKT5 387 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 NDRG2Q9UN36 371 aaKnown RBP13.82□□□□□ -0.2
USE1-207ENST00000596136 CTNND2Q9UQB3 1225 aa13.82□□□□□ -0.2
USE1-207ENST00000596136 FAM200BP0CF97 657 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 SP9P0CG40 484 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 TUBP50607 506 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 MAP3K7CLP57077 242 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 CUL2Q13617 745 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 CCDC40Q4G0X9 1142 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 PPP1R26Q5T8A7 1209 aaPredicted RBP13.81□□□□□ -0.2
USE1-207ENST00000596136 ARHGAP17Q68EM7 881 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 TRIM68Q6AZZ1 485 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 CC2D1AQ6P1N0 951 aaPredicted RBP13.81□□□□□ -0.2
USE1-207ENST00000596136 NELL1Q92832 810 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 FBXO32Q969P5 355 aa13.81□□□□□ -0.2
USE1-207ENST00000596136 TMEM176AQ96HP8 235 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms