RNA–Protein interactions for RNA: ENST00000593706.3

PNKP-202, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 849 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-202ENST00000593706 PCED1BQ96HM7 432 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 CEP295NLQ96MC4 621 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 LSM14BQ9BX40 385 aaKnown RBP15.72■□□□□ 0.11
PNKP-202ENST00000593706 LINC00597Q9H2U6 94 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 SNX25Q9H3E2 840 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 HSPBP1Q9NZL4 362 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 CFAP45Q9UL16 551 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 INVSQ9Y283 1065 aa15.72■□□□□ 0.11
PNKP-202ENST00000593706 BCLAF3A2AJT9 711 aaKnown RBP15.71■□□□□ 0.11
PNKP-202ENST00000593706 KCNK5O95279 499 aa15.71■□□□□ 0.11
PNKP-202ENST00000593706 DLATP10515 647 aaKnown RBP15.71■□□□□ 0.11
PNKP-202ENST00000593706 PFKLP17858 780 aa15.71■□□□□ 0.11
PNKP-202ENST00000593706 WARSP23381 471 aaKnown RBP15.71■□□□□ 0.11
PNKP-202ENST00000593706 HOXD13P35453 343 aa15.71■□□□□ 0.11
PNKP-202ENST00000593706 OPRD1P41143 372 aa15.71■□□□□ 0.11
PNKP-202ENST00000593706 TNNC1P63316 161 aa15.71■□□□□ 0.11
PNKP-202ENST00000593706 IFRD2Q12894 506 aaPredicted RBP15.71■□□□□ 0.11
PNKP-202ENST00000593706 EPM2AIP1Q7L775 607 aaPredicted RBP15.71■□□□□ 0.11
PNKP-202ENST00000593706 CYP2U1Q7Z449 544 aa15.71■□□□□ 0.11
PNKP-202ENST00000593706 FILIP1Q7Z7B0 1213 aa15.71■□□□□ 0.11
PNKP-202ENST00000593706 MYCBPAPQ8TBZ2 947 aa15.71■□□□□ 0.11
PNKP-202ENST00000593706 USP33Q8TEY7 942 aa15.71■□□□□ 0.11
PNKP-202ENST00000593706 HPS3Q969F9 1004 aa15.71■□□□□ 0.11
PNKP-202ENST00000593706 C7orf25Q9BPX7 421 aa15.71■□□□□ 0.11
PNKP-202ENST00000593706 MAGEF1Q9HAY2 307 aa15.71■□□□□ 0.11
PNKP-202ENST00000593706 KIAA1586Q9HCI6 787 aa15.71■□□□□ 0.11
PNKP-202ENST00000593706 SMPD4Q9NXE4 827 aa15.71■□□□□ 0.11
PNKP-202ENST00000593706 CIZ1Q9ULV3 898 aaPredicted RBP15.71■□□□□ 0.11
PNKP-202ENST00000593706 LNP1A1A4G5 178 aa15.7■□□□□ 0.1
PNKP-202ENST00000593706 F8VP50 259 aa15.7■□□□□ 0.1
PNKP-202ENST00000593706 SLC9A3R1O14745 358 aaPredicted RBP15.7■□□□□ 0.1
PNKP-202ENST00000593706 SCAMP3O14828 347 aaKnown RBP15.7■□□□□ 0.1
PNKP-202ENST00000593706 POLR2DO15514 142 aaKnown RBP15.7■□□□□ 0.1
PNKP-202ENST00000593706 CYP17A1P05093 508 aa15.7■□□□□ 0.1
PNKP-202ENST00000593706 TNNI1P19237 187 aa15.7■□□□□ 0.1
PNKP-202ENST00000593706 PPP3CCP48454 512 aa15.7■□□□□ 0.1
PNKP-202ENST00000593706 SNRNP35Q16560 246 aaKnown RBP15.7■□□□□ 0.1
PNKP-202ENST00000593706 PMS2CLQ68D20 193 aa15.7■□□□□ 0.1
PNKP-202ENST00000593706 CCDC33Q8N5R6 958 aa15.7■□□□□ 0.1
PNKP-202ENST00000593706 OR6B3Q8NGW1 331 aa15.7■□□□□ 0.1
PNKP-202ENST00000593706 SLITRK1Q96PX8 696 aa15.7■□□□□ 0.1
PNKP-202ENST00000593706 FNBP1Q96RU3 617 aa15.7■□□□□ 0.1
PNKP-202ENST00000593706 TTLL2Q9BWV7 592 aa15.7■□□□□ 0.1
PNKP-202ENST00000593706 LRRC27Q9C0I9 530 aa15.7■□□□□ 0.1
PNKP-202ENST00000593706 MMP17Q9ULZ9 603 aa15.7■□□□□ 0.1
PNKP-202ENST00000593706 CPQQ9Y646 472 aa15.7■□□□□ 0.1
PNKP-202ENST00000593706 SPEGQ15772 3267 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 C4orf47A7E2U8 309 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 K7EQS6 105 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 ACTN4O43707 911 aaKnown RBP15.69■□□□□ 0.1
PNKP-202ENST00000593706 ALDH1A2O94788 518 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 GNL1P36915 607 aaPredicted RBP15.69■□□□□ 0.1
PNKP-202ENST00000593706 DHPSP49366 369 aaPredicted RBP15.69■□□□□ 0.1
PNKP-202ENST00000593706 NOVA1P51513 510 aaKnown RBP15.69■□□□□ 0.1
PNKP-202ENST00000593706 CYP2J2P51589 502 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 NOP14P78316 857 aaKnown RBP15.69■□□□□ 0.1
PNKP-202ENST00000593706 ASIC1P78348 528 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 SHC2P98077 582 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 ZXDBP98169 803 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 DAB2IPQ5VWQ8 1189 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 TDRD10Q5VZ19 366 aaKnown RBP15.69■□□□□ 0.1
PNKP-202ENST00000593706 TRAPPC11Q7Z392 1133 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 LIMS2Q7Z4I7 341 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 RDH13Q8NBN7 331 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 CCDC127Q96BQ5 260 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 SPACA7Q96KW9 195 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 CNOT6LQ96LI5 555 aaKnown RBP15.69■□□□□ 0.1
PNKP-202ENST00000593706 CGRRF1Q99675 332 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 MRPL45Q9BRJ2 306 aaKnown RBP15.69■□□□□ 0.1
PNKP-202ENST00000593706 ELOVL4Q9GZR5 314 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 HPSEQ9Y251 543 aa15.69■□□□□ 0.1
PNKP-202ENST00000593706 FAM237AA0A1B0GTK4 181 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 ZNF840PA6NDX5 716 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 KHNYNO15037 678 aaKnown RBP15.68■□□□□ 0.1
PNKP-202ENST00000593706 EIF3DO15371 548 aaKnown RBP eCLIP15.68■□□□□ 0.1
PNKP-202ENST00000593706 ADH1CP00326 375 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 APODP05090 189 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 MBL2P11226 248 aaPredicted RBP15.68■□□□□ 0.1
PNKP-202ENST00000593706 BCKDHBP21953 392 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 CASP1P29466 404 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 SLC7A9P82251 487 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 AMPD3Q01432 767 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 KDSRQ06136 332 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 TAF10Q12962 218 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 CRY1Q16526 586 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 WDR72Q3MJ13 1102 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 FAM26FQ5R3K3 315 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 RASSF3Q86WH2 238 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 DDX42Q86XP3 938 aaKnown RBP eCLIP15.68■□□□□ 0.1
PNKP-202ENST00000593706 ALLCQ8N6M5 410 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 MDGA1Q8NFP4 955 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 C8orf48Q96LL4 319 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 PNKPQ96T60 521 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 RNF38Q9H0F5 515 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 TMEM9BQ9NQ34 198 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 BCCIPQ9P287 314 aaKnown RBP eCLIP15.68■□□□□ 0.1
PNKP-202ENST00000593706 CFAP97Q9P2B7 532 aa15.68■□□□□ 0.1
PNKP-202ENST00000593706 PCNX2A6NKB5 2137 aa15.67■□□□□ 0.1
PNKP-202ENST00000593706 CACNA1GO43497 2377 aa15.67■□□□□ 0.1
PNKP-202ENST00000593706 A8MXQ7 604 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms