RNA–Protein interactions for RNA: ENST00000592533.5

ZNF540-210, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 2 BASIC

Gene ZNF540, Length 3,147 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-210ENST00000592533 SEPT7Q16181 437 aaKnown RBP12.12□□□□□ -0.47
ZNF540-210ENST00000592533 BBS9Q3SYG4 887 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 SAMD7Q7Z3H4 446 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 RFX6Q8HWS3 928 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 IGDCC3Q8IVU1 814 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 TEX9Q8N6V9 391 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 FAM71DQ8N9W8 422 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 RFWD2Q8NHY2 731 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 USP6NLQ92738 828 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 PTPRN2Q92932 1015 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 KLRG1Q96E93 195 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 MIPEPQ99797 713 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 TSSK1BQ9BXA7 367 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 C10orf88Q9H8K7 445 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 ZNF180Q9UJW8 692 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.12□□□□□ -0.47
ZNF540-210ENST00000592533 EVPLQ92817 2033 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 RALGAPA2Q2PPJ7 1873 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 CCDC22O60826 627 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 CILPO75339 1184 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 MT-ND3P03897 115 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 HMGCRP04035 888 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 DLDP09622 509 aaKnown RBP12.12□□□□□ -0.47
ZNF540-210ENST00000592533 ELK3P41970 407 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 GMPSP49915 693 aaPredicted RBP12.12□□□□□ -0.47
ZNF540-210ENST00000592533 ZNF200P98182 395 aaPredicted RBP12.12□□□□□ -0.47
ZNF540-210ENST00000592533 ROR1Q01973 937 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 PTPN11Q06124 597 aaPredicted RBP12.12□□□□□ -0.47
ZNF540-210ENST00000592533 PTK7Q13308 1070 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 ZNF449Q6P9G9 518 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 ILDR2Q71H61 639 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 RIOX2Q8IUF8 465 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 APOBEC3FQ8IUX4 373 aaKnown RBP12.12□□□□□ -0.47
ZNF540-210ENST00000592533 RNF149Q8NC42 400 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 SPATA18Q8TC71 538 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 MRRFQ96E11 262 aaKnown RBP12.12□□□□□ -0.47
ZNF540-210ENST00000592533 SERAC1Q96JX3 654 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 SDCBP2Q9H190 292 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 DENND2DQ9H6A0 471 aaPredicted RBP12.12□□□□□ -0.47
ZNF540-210ENST00000592533 CYP3A43Q9HB55 503 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 ASNSD1Q9NWL6 643 aa12.12□□□□□ -0.47
ZNF540-210ENST00000592533 LPXNO60711 386 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 SMNDC1O75940 238 aaKnown RBP eCLIP12.11□□□□□ -0.47
ZNF540-210ENST00000592533 RNF8O76064 485 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 CDK16Q00536 496 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 CDK18Q07002 472 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 ZNF667Q5HYK9 610 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 ATF7IP2Q5U623 682 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 LBX2Q6XYB7 198 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 PLPPR4Q7Z2D5 763 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 NAF1Q96HR8 494 aaKnown RBP12.11□□□□□ -0.47
ZNF540-210ENST00000592533 NUDCD1Q96RS6 583 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 PEBP4Q96S96 227 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 NFKBIZQ9BYH8 718 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 MMADHCQ9H3L0 296 aaPredicted RBP12.11□□□□□ -0.47
ZNF540-210ENST00000592533 DCLRE1BQ9H816 532 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 PIM2Q9P1W9 311 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 CHMP2BQ9UQN3 213 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 TNFSF13BQ9Y275 285 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 CITO14578 2027 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 CD19P15391 556 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 ATICP31939 592 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 GPD2P43304 727 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 TFDP2Q14188 446 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 C4orf50Q6ZRC1 276 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 EMC1Q8N766 993 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 BTBD10Q9BSF8 475 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 CNPY3Q9BT09 278 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 CORO1CQ9ULV4 474 aaPredicted RBP12.11□□□□□ -0.47
ZNF540-210ENST00000592533 SOWAHBA6NEL2 793 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 KBTBD13C9JR72 458 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 MICAL2O94851 1124 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 HAUS5O94927 633 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 GSTA2P09210 222 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 CCNFP41002 786 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 BASP1P80723 227 aaKnown RBP12.11□□□□□ -0.47
ZNF540-210ENST00000592533 KBTBD12Q3ZCT8 623 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 C1orf127Q8N9H9 656 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 CADM1Q9BY67 442 aaKnown RBP12.11□□□□□ -0.47
ZNF540-210ENST00000592533 PDGFDQ9GZP0 370 aaPredicted RBP12.11□□□□□ -0.47
ZNF540-210ENST00000592533 ELOVL4Q9GZR5 314 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 USP29Q9HBJ7 922 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 PAK5Q9P286 719 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 TTLL3Q9Y4R7 772 aa12.11□□□□□ -0.47
ZNF540-210ENST00000592533 CFAP69A5D8W1 941 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 ZNF487B1APH4 448 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 NFKBIEO00221 500 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 TRDMT1O14717 391 aaKnown RBP12.1□□□□□ -0.47
ZNF540-210ENST00000592533 SRGAP2CP0DJJ0 459 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 PRKCHP24723 683 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 RAP1GAPP47736 663 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 TAF5Q15542 800 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 TAF11Q15544 211 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 SLC26A11Q86WA9 606 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 TMEM176AQ96HP8 235 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 TWNKQ96RR1 684 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 GPR20Q99678 358 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 C2CD4BA6NLJ0 364 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 DPYSL4O14531 572 aa12.1□□□□□ -0.47
ZNF540-210ENST00000592533 VDRP11473 427 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms