RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 C8orf33Q9H7E9 229 aaPredicted RBP28.87■■■□□ 2.21
SMAD4-213ENST00000591914 GKN1Q9NS71 199 aa28.87■■■□□ 2.21
SMAD4-213ENST00000591914 CISHQ9NSE2 258 aa28.87■■■□□ 2.21
SMAD4-213ENST00000591914 GTSE1Q9NYZ3 720 aa28.87■■■□□ 2.21
SMAD4-213ENST00000591914 PMM2O15305 246 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 BEST1O76090 585 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 HDCP19113 662 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 MAGEA9P43362 315 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 FMO5P49326 533 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 KPNA1P52294 538 aaPredicted RBP28.86■■■□□ 2.21
SMAD4-213ENST00000591914 SLC5A3P53794 718 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 TNK2Q07912 1038 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 USP4Q13107 963 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 ZNF77Q15935 545 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 C1orf228Q6PIY5 440 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 SCAMP5Q8TAC9 235 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 OVCA2Q8WZ82 227 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 ATOH1Q92858 354 aaPredicted RBP28.86■■■□□ 2.21
SMAD4-213ENST00000591914 CYFIP2Q96F07 1278 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 DNAI2Q9GZS0 605 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 CLSTN2Q9H4D0 955 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 COMMD8Q9NX08 183 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 ARHGAP26Q9UNA1 814 aa28.86■■■□□ 2.21
SMAD4-213ENST00000591914 HELZP42694 1942 aaKnown RBP28.86■■■□□ 2.21
SMAD4-213ENST00000591914 PATJQ8NI35 1801 aa28.85■■■□□ 2.21
SMAD4-213ENST00000591914 FAM92AA1XBS5 289 aa28.85■■■□□ 2.21
SMAD4-213ENST00000591914 NCAM2O15394 837 aa28.85■■■□□ 2.21
SMAD4-213ENST00000591914 FAM200BP0CF97 657 aa28.85■■■□□ 2.21
SMAD4-213ENST00000591914 TCF3P15923 654 aa28.85■■■□□ 2.21
SMAD4-213ENST00000591914 RPS9P46781 194 aaKnown RBP28.85■■■□□ 2.21
SMAD4-213ENST00000591914 MARSP56192 900 aaKnown RBP28.85■■■□□ 2.21
SMAD4-213ENST00000591914 IFRD2Q12894 506 aaPredicted RBP28.85■■■□□ 2.21
SMAD4-213ENST00000591914 PDZD8Q8NEN9 1154 aa28.85■■■□□ 2.21
SMAD4-213ENST00000591914 PHOX2BQ99453 314 aa28.85■■■□□ 2.21
SMAD4-213ENST00000591914 GNA14O95837 355 aa28.84■■■□□ 2.21
SMAD4-213ENST00000591914 OLFM2O95897 454 aa28.84■■■□□ 2.21
SMAD4-213ENST00000591914 OAS1P00973 400 aaKnown RBP28.84■■■□□ 2.21
SMAD4-213ENST00000591914 ADORA2BP29275 332 aa28.84■■■□□ 2.21
SMAD4-213ENST00000591914 SOX9P48436 509 aa28.84■■■□□ 2.21
SMAD4-213ENST00000591914 MAP3K7CLP57077 242 aa28.84■■■□□ 2.21
SMAD4-213ENST00000591914 ITPRIPL2Q3MIP1 535 aa28.84■■■□□ 2.21
SMAD4-213ENST00000591914 RALGPS2Q86X27 583 aaPredicted RBP28.84■■■□□ 2.21
SMAD4-213ENST00000591914 C1orf210Q8IVY1 113 aa28.84■■■□□ 2.21
SMAD4-213ENST00000591914 TRIM59Q8IWR1 403 aa28.84■■■□□ 2.21
SMAD4-213ENST00000591914 FBXO32Q969P5 355 aa28.84■■■□□ 2.21
SMAD4-213ENST00000591914 HPS4Q9NQG7 708 aa28.84■■■□□ 2.21
SMAD4-213ENST00000591914 FAM86C1Q9NVL1 165 aa28.84■■■□□ 2.21
SMAD4-213ENST00000591914 RWDD2AQ9UIY3 292 aa28.84■■■□□ 2.21
SMAD4-213ENST00000591914 NDRG2Q9UN36 371 aaKnown RBP28.84■■■□□ 2.21
SMAD4-213ENST00000591914 SPECC1L-ADORA2AF8WAN1 911 aa28.83■■■□□ 2.21
SMAD4-213ENST00000591914 HOXD11P31277 338 aaPredicted RBP28.83■■■□□ 2.21
SMAD4-213ENST00000591914 CTHP32929 405 aa28.83■■■□□ 2.21
SMAD4-213ENST00000591914 CUL2Q13617 745 aa28.83■■■□□ 2.21
SMAD4-213ENST00000591914 MTF1Q14872 753 aa28.83■■■□□ 2.21
SMAD4-213ENST00000591914 ZNF394Q53GI3 561 aa28.83■■■□□ 2.21
SMAD4-213ENST00000591914 CC2D1AQ6P1N0 951 aaPredicted RBP28.83■■■□□ 2.21
SMAD4-213ENST00000591914 CLEC20AQ6ZU45 233 aa28.83■■■□□ 2.21
SMAD4-213ENST00000591914 TTC8Q8TAM2 541 aa28.83■■■□□ 2.21
SMAD4-213ENST00000591914 SH3RF2Q8TEC5 729 aa28.83■■■□□ 2.21
SMAD4-213ENST00000591914 SRRTQ9BXP5 876 aaKnown RBP28.83■■■□□ 2.21
SMAD4-213ENST00000591914 RNF38Q9H0F5 515 aa28.83■■■□□ 2.21
SMAD4-213ENST00000591914 PIEZO1Q92508 2521 aa28.83■■■□□ 2.21
SMAD4-213ENST00000591914 MYH10P35580 1976 aa28.82■■■□□ 2.2
SMAD4-213ENST00000591914 MYO15AQ9UKN7 3530 aa28.82■■■□□ 2.2
SMAD4-213ENST00000591914 RAD23BP54727 409 aa28.82■■■□□ 2.2
SMAD4-213ENST00000591914 SLC7A9P82251 487 aa28.82■■■□□ 2.2
SMAD4-213ENST00000591914 ZXDBP98169 803 aa28.82■■■□□ 2.2
SMAD4-213ENST00000591914 SNX30Q5VWJ9 437 aa28.82■■■□□ 2.2
SMAD4-213ENST00000591914 SLC4A11Q8NBS3 891 aa28.82■■■□□ 2.2
SMAD4-213ENST00000591914 TMEM176AQ96HP8 235 aa28.82■■■□□ 2.2
SMAD4-213ENST00000591914 PNPLA8Q9NP80 782 aa28.82■■■□□ 2.2
SMAD4-213ENST00000591914 HHLA1C9JL84 531 aa28.81■■■□□ 2.2
SMAD4-213ENST00000591914 P4HA2O15460 535 aa28.81■■■□□ 2.2
SMAD4-213ENST00000591914 ABL1P00519 1130 aa28.81■■■□□ 2.2
SMAD4-213ENST00000591914 RUNX3Q13761 415 aa28.81■■■□□ 2.2
SMAD4-213ENST00000591914 PDGFRLQ15198 375 aa28.81■■■□□ 2.2
SMAD4-213ENST00000591914 PPP1R26Q5T8A7 1209 aaPredicted RBP28.81■■■□□ 2.2
SMAD4-213ENST00000591914 TRIM68Q6AZZ1 485 aa28.81■■■□□ 2.2
SMAD4-213ENST00000591914 TXNDC11Q6PKC3 985 aa28.81■■■□□ 2.2
SMAD4-213ENST00000591914 HEXIM2Q96MH2 286 aaKnown RBP28.81■■■□□ 2.2
SMAD4-213ENST00000591914 MED15Q96RN5 788 aa28.81■■■□□ 2.2
SMAD4-213ENST00000591914 FBXO44Q9H4M3 255 aa28.81■■■□□ 2.2
SMAD4-213ENST00000591914 EBF3Q9H4W6 596 aa28.81■■■□□ 2.2
SMAD4-213ENST00000591914 LMBRD1Q9NUN5 540 aa28.81■■■□□ 2.2
SMAD4-213ENST00000591914 OTOL1A6NHN0 477 aaPredicted RBP28.8■■■□□ 2.2
SMAD4-213ENST00000591914 ZDHHC11BP0C7U3 371 aa28.8■■■□□ 2.2
SMAD4-213ENST00000591914 MLKLQ8NB16 471 aa28.8■■■□□ 2.2
SMAD4-213ENST00000591914 LMO3Q8TAP4 145 aa28.8■■■□□ 2.2
SMAD4-213ENST00000591914 OSCP1Q8WVF1 389 aa28.8■■■□□ 2.2
SMAD4-213ENST00000591914 CHORDC1Q9UHD1 332 aaPredicted RBP28.8■■■□□ 2.2
SMAD4-213ENST00000591914 VPS13AQ96RL7 3174 aa28.79■■■□□ 2.2
SMAD4-213ENST00000591914 FGFR1OPO95684 399 aaKnown RBP28.79■■■□□ 2.2
SMAD4-213ENST00000591914 CHRNB1P11230 501 aa28.79■■■□□ 2.2
SMAD4-213ENST00000591914 ARSAP15289 507 aa28.79■■■□□ 2.2
SMAD4-213ENST00000591914 TBXAS1P24557 533 aaPredicted RBP28.79■■■□□ 2.2
SMAD4-213ENST00000591914 TUBP50607 506 aa28.79■■■□□ 2.2
SMAD4-213ENST00000591914 LRMPQ12912 555 aa28.79■■■□□ 2.2
SMAD4-213ENST00000591914 GPRIN1Q7Z2K8 1008 aa28.79■■■□□ 2.2
SMAD4-213ENST00000591914 MAML2Q8IZL2 1156 aaPredicted RBP28.79■■■□□ 2.2
SMAD4-213ENST00000591914 UBR7Q8N806 425 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms