RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 GMIPQ9P107 970 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 FBXL21Q9UKT6 434 aa12.2□□□□□ -0.46
VMP1-211ENST00000591315 KIF26AQ9ULI4 1882 aaPredicted RBP12.19□□□□□ -0.46
VMP1-211ENST00000591315 MYO16Q9Y6X6 1858 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 SCAMP3O14828 347 aaKnown RBP12.19□□□□□ -0.46
VMP1-211ENST00000591315 PNMA6AP0CW24 399 aaPredicted RBP12.19□□□□□ -0.46
VMP1-211ENST00000591315 TBXAS1P24557 533 aaPredicted RBP12.19□□□□□ -0.46
VMP1-211ENST00000591315 BRD2P25440 801 aaKnown RBP12.19□□□□□ -0.46
VMP1-211ENST00000591315 YWHAQP27348 245 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 ZNF132P52740 706 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 ZXDBP98169 803 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 KCNMA1Q12791 1236 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 CETN1Q12798 172 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 KRT31Q15323 416 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 ARHGAP44Q17R89 818 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 GOLGA7BQ2TAP0 167 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 ANO6Q4KMQ2 910 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 GBP6Q6ZN66 633 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 AOPEPQ8N6M6 819 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 RBBP8NLQ8NC74 664 aaPredicted RBP12.19□□□□□ -0.46
VMP1-211ENST00000591315 TTC8Q8TAM2 541 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 NDRG1Q92597 394 aaKnown RBP12.19□□□□□ -0.46
VMP1-211ENST00000591315 FBXO32Q969P5 355 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 FUCA2Q9BTY2 467 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 DUSP16Q9BY84 665 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 GPR88Q9GZN0 384 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 VPS16Q9H269 839 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 NDST4Q9H3R1 872 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 SLC2A4RGQ9NR83 387 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 IL37Q9NZH6 218 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 TRPM5Q9NZQ8 1165 aa12.19□□□□□ -0.46
VMP1-211ENST00000591315 UXTQ9UBK9 157 aaPredicted RBP12.19□□□□□ -0.46
VMP1-211ENST00000591315 MYOFQ9NZM1 2061 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 SYCE3A1L190 88 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 SHISA7A6NL88 538 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 BECN2A8MW95 431 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 PRR33A8MZF0 331 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 O00370 1275 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 PES1O00541 588 aaKnown RBP12.18□□□□□ -0.46
VMP1-211ENST00000591315 CYP26A1O43174 497 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 PI15O43692 258 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 GABBR2O75899 941 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 KRT5P13647 590 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 PSMC3P17980 439 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 CD72P21854 359 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 KLK7P49862 253 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 GCNT1Q02742 428 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 TNK2Q07912 1038 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 EXOC3L4Q17RC7 722 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 KLHL40Q2TBA0 621 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 CT47A1Q5JQC4 288 aaPredicted RBP12.18□□□□□ -0.46
VMP1-211ENST00000591315 ARHGAP17Q68EM7 881 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 CWF19L1Q69YN2 538 aaKnown RBP12.18□□□□□ -0.46
VMP1-211ENST00000591315 MFSD6LQ8IWD5 586 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 FAM114A1Q8IWE2 563 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 TTC39CQ8N584 583 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 FLCNQ8NFG4 579 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 TRMT61BQ9BVS5 477 aaKnown RBP12.18□□□□□ -0.46
VMP1-211ENST00000591315 CCSER2Q9H7U1 834 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 BRD9Q9H8M2 597 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 NMUR1Q9HB89 426 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 HEBP1Q9NRV9 189 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 OSER1Q9NX31 292 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 SMPD4Q9NXE4 827 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 TSPAN16Q9UKR8 245 aa12.18□□□□□ -0.46
VMP1-211ENST00000591315 COL4A2P08572 1712 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 ATG2BQ96BY7 2078 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 CACNA1IQ9P0X4 2223 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 TRAV19A0A0A6YYK7 116 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 ARNTLO00327 626 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 RTN3O95197 1032 aaPredicted RBP12.17□□□□□ -0.46
VMP1-211ENST00000591315 TBX18O95935 607 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 CKMP06732 381 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 VDRP11473 427 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 ATP1A3P13637 1013 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 HDCP19113 662 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 AVPR1AP37288 418 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 SOX9P48436 509 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 KIF11P52732 1056 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 YWHAEP62258 255 aaKnown RBP12.17□□□□□ -0.46
VMP1-211ENST00000591315 PLCB2Q00722 1185 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 MYL5Q02045 173 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 PDE4CQ08493 712 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 SLC44A4Q53GD3 710 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 SGO2Q562F6 1265 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 TRIM68Q6AZZ1 485 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 APTXQ7Z2E3 356 aaKnown RBP12.17□□□□□ -0.46
VMP1-211ENST00000591315 BMP8AQ7Z5Y6 402 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 PIGZQ86VD9 579 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 DHX40Q8IX18 779 aaKnown RBP12.17□□□□□ -0.46
VMP1-211ENST00000591315 FBXL6Q8N531 539 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 TMEM105Q8N8V8 129 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 ANKRD52Q8NB46 1076 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 WBP2Q969T9 261 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 CEP295NLQ96MC4 621 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 FOXQ1Q9C009 403 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 ARHGEF3Q9NR81 526 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 TDP1Q9NUW8 608 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 WNT16Q9UBV4 365 aa12.17□□□□□ -0.46
VMP1-211ENST00000591315 APEX2Q9UBZ4 518 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms