RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 ARNTLO00327 626 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 ABL1P00519 1130 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 CKMP06732 381 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 USP17L7P0C7H9 530 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 HDCP19113 662 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 CD72P21854 359 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 ERCC5P28715 1186 aaPredicted RBP9.73□□□□□ -0.85
DNMT1-223ENST00000591239 SLC5A3P53794 718 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 YWHAEP62258 255 aaKnown RBP9.73□□□□□ -0.85
DNMT1-223ENST00000591239 ZNF268Q14587 947 aaPredicted RBP9.73□□□□□ -0.85
DNMT1-223ENST00000591239 ARHGAP29Q52LW3 1261 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 CT47A1Q5JQC4 288 aaPredicted RBP9.73□□□□□ -0.85
DNMT1-223ENST00000591239 RBM43Q6ZSC3 357 aaKnown RBP9.73□□□□□ -0.85
DNMT1-223ENST00000591239 CLEC20AQ6ZU45 233 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 TPRG1Q6ZUI0 275 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 PPM1KQ8N3J5 372 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 ARL14EPQ8N8R7 260 aaPredicted RBP9.73□□□□□ -0.85
DNMT1-223ENST00000591239 EHBP1Q8NDI1 1231 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 PJA1Q8NG27 643 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 OVCA2Q8WZ82 227 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 FBXO32Q969P5 355 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 ZFYVE19Q96K21 471 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 NT5C1BQ96P26 610 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 DDX23Q9BUQ8 820 aaKnown RBP9.73□□□□□ -0.85
DNMT1-223ENST00000591239 FOXQ1Q9C009 403 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 THAP9Q9H5L6 903 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 KIF9Q9HAQ2 790 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 THG1LQ9NWX6 298 aaKnown RBP9.73□□□□□ -0.85
DNMT1-223ENST00000591239 COMMD8Q9NX08 183 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 GCNT4Q9P109 453 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 CHORDC1Q9UHD1 332 aaPredicted RBP9.73□□□□□ -0.85
DNMT1-223ENST00000591239 SIT1Q9Y3P8 196 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 ZNF638Q14966 1978 aaKnown RBP9.73□□□□□ -0.85
DNMT1-223ENST00000591239 MUC6Q6W4X9 2439 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 WDR87Q6ZQQ6 2873 aa9.73□□□□□ -0.85
DNMT1-223ENST00000591239 ANAPC1Q9H1A4 1944 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 KANSL1LA0AUZ9 987 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 FAM92AA1XBS5 289 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 HHLA1C9JL84 531 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 MBD3O95983 291 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 DCNP07585 359 aaKnown RBP9.72□□□□□ -0.85
DNMT1-223ENST00000591239 GLULP15104 373 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 PFKLP17858 780 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 MTIF2P46199 727 aaKnown RBP9.72□□□□□ -0.85
DNMT1-223ENST00000591239 PDE6CP51160 858 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 ARHGAP17Q68EM7 881 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 ZNF852Q6ZMS4 543 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 RRAGAQ7L523 313 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 UBR7Q8N806 425 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 TTC16Q8NEE8 873 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 PDZD8Q8NEN9 1154 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 RIN3Q8TB24 985 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 CSGALNACT1Q8TDX6 532 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 KAT5Q92993 513 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 JAKMIP2Q96AA8 810 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 PRRX2Q99811 253 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 DUSP16Q9BY84 665 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 RNF38Q9H0F5 515 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 INTS2Q9H0H0 1204 aaKnown RBP9.72□□□□□ -0.85
DNMT1-223ENST00000591239 FBXO44Q9H4M3 255 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 PNPLA8Q9NP80 782 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 GKN1Q9NS71 199 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 MTF2Q9Y483 593 aaPredicted RBP9.72□□□□□ -0.85
DNMT1-223ENST00000591239 PIAS3Q9Y6X2 628 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 KMT2EQ8IZD2 1858 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 MYH10P35580 1976 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 FRYLO94915 3013 aa9.72□□□□□ -0.85
DNMT1-223ENST00000591239 COL4A3Q01955 1670 aa9.71□□□□□ -0.85
DNMT1-223ENST00000591239 USP34Q70CQ2 3546 aa9.71□□□□□ -0.85
DNMT1-223ENST00000591239 SHISA7A6NL88 538 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 FAM170BA6NMN3 283 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 MAN2B1O00754 1011 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 GALR2O43603 387 aaPredicted RBP9.71□□□□□ -0.86
DNMT1-223ENST00000591239 OAS1P00973 400 aaKnown RBP9.71□□□□□ -0.86
DNMT1-223ENST00000591239 ACO1P21399 889 aaKnown RBP9.71□□□□□ -0.86
DNMT1-223ENST00000591239 KPNA1P52294 538 aaPredicted RBP9.71□□□□□ -0.86
DNMT1-223ENST00000591239 MLLT6P55198 1093 aaPredicted RBP9.71□□□□□ -0.86
DNMT1-223ENST00000591239 GCNT1Q02742 428 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 TNK2Q07912 1038 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 UBXN2BQ14CS0 331 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 ZNF77Q15935 545 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 SGO2Q562F6 1265 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 HSP90AA4PQ58FG1 418 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 CCDC183Q5T5S1 534 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 SNX30Q5VWJ9 437 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 CC2D1AQ6P1N0 951 aaPredicted RBP9.71□□□□□ -0.86
DNMT1-223ENST00000591239 TMEM270Q6UE05 265 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 GPRIN1Q7Z2K8 1008 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 ARHGEF19Q8IW93 802 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 FAM114A1Q8IWE2 563 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 ANKRD52Q8NB46 1076 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 PRSS33Q8NF86 280 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 SH3RF2Q8TEC5 729 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 NELL2Q99435 816 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 FAM83CQ9BQN1 747 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 CRACR2AQ9BSW2 395 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 OSBPL6Q9BZF3 934 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 C8orf33Q9H7E9 229 aaPredicted RBP9.71□□□□□ -0.86
DNMT1-223ENST00000591239 LTB4R2Q9NPC1 389 aa9.71□□□□□ -0.86
DNMT1-223ENST00000591239 GTSE1Q9NYZ3 720 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms