RNA–Protein interactions for RNA: ENST00000590064.1

APBA3-205, Transcript of amyloid beta precursor protein binding family A member 3, humanhuman

TSL 1 (best)

Gene APBA3, Length 4,250 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBA3-205ENST00000590064 ARHGAP8P85298 464 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 TBL3Q12788 808 aaKnown RBP16.82■□□□□ 0.28
APBA3-205ENST00000590064 NFIL3Q16649 462 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 POTEAQ6S8J7 498 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.82■□□□□ 0.28
APBA3-205ENST00000590064 NET1Q7Z628 596 aaPredicted RBP16.82■□□□□ 0.28
APBA3-205ENST00000590064 RNF148Q8N7C7 305 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 GLIS1Q8NBF1 620 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 CAAP1Q9H8G2 361 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 HERC5Q9UII4 1024 aaKnown RBP16.82■□□□□ 0.28
APBA3-205ENST00000590064 MAPTP10636 758 aaKnown RBP16.82■□□□□ 0.28
APBA3-205ENST00000590064 SERPINB5P36952 375 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 RPS6P62753 249 aaKnown RBP16.82■□□□□ 0.28
APBA3-205ENST00000590064 PRKG1Q13976 671 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 APOBEC3HQ6NTF7 200 aaKnown RBP16.82■□□□□ 0.28
APBA3-205ENST00000590064 C16orf46Q6P387 395 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 SESTD1Q86VW0 696 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 LENG9Q96B70 501 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 PHACTR1Q9C0D0 580 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 WDR35Q9P2L0 1181 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 PRKAG3Q9UGI9 489 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 USP21Q9UK80 565 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 PCDHAC2Q9Y5I4 1007 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 TIAM2Q8IVF5 1701 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 TCEA3O75764 348 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 C6orf222P0C671 652 aaPredicted RBP16.82■□□□□ 0.28
APBA3-205ENST00000590064 EEF1B2P24534 225 aaKnown RBP16.82■□□□□ 0.28
APBA3-205ENST00000590064 ZNF568Q3ZCX4 644 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 LIN52Q52LA3 116 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 FASTKD1Q53R41 847 aaKnown RBP16.82■□□□□ 0.28
APBA3-205ENST00000590064 LPCAT4Q643R3 524 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 GMCL1P1Q8NEA9 526 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 CRAMP1Q96RY5 1269 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 NIF3L1Q9GZT8 377 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 GPATCH2LQ9NWQ4 482 aa16.82■□□□□ 0.28
APBA3-205ENST00000590064 GOLGA8QA0A0J9YX86 632 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 GOLGA8OA6NCC3 632 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 GOLGA8NF8WBI6 632 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 ZMPSTE24O75844 475 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 SEC24DO94855 1032 aaPredicted RBP16.81■□□□□ 0.28
APBA3-205ENST00000590064 GARTP22102 1010 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 GTF2BQ00403 316 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 BAATQ14032 418 aaPredicted RBP16.81■□□□□ 0.28
APBA3-205ENST00000590064 CDCA2Q69YH5 1023 aaPredicted RBP16.81■□□□□ 0.28
APBA3-205ENST00000590064 CERS5Q8N5B7 392 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 MCUQ8NE86 351 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 RNF34Q969K3 372 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 GRIP2Q9C0E4 1043 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 RPF1Q9H9Y2 349 aaKnown RBP16.81■□□□□ 0.28
APBA3-205ENST00000590064 FBXO40Q9UH90 709 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 NLRP11P59045 1033 aaKnown RBP16.81■□□□□ 0.28
APBA3-205ENST00000590064 NOMO3P69849 1222 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 LCA5Q86VQ0 697 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 PDZD8Q8NEN9 1154 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 VCPIP1Q96JH7 1222 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 MTMR12Q9C0I1 747 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 OAS1P00973 400 aaKnown RBP16.81■□□□□ 0.28
APBA3-205ENST00000590064 DHDDSQ86SQ9 333 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 CDR2LQ86X02 465 aaPredicted RBP16.81■□□□□ 0.28
APBA3-205ENST00000590064 MAP4K3Q8IVH8 894 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 CDKL3Q8IVW4 592 aaPredicted RBP16.81■□□□□ 0.28
APBA3-205ENST00000590064 CATSPER1Q8NEC5 780 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 C7orf43Q8WVR3 580 aa16.81■□□□□ 0.28
APBA3-205ENST00000590064 UPF3AQ9H1J1 476 aaKnown RBP16.81■□□□□ 0.28
APBA3-205ENST00000590064 JPH1Q9HDC5 661 aaPredicted RBP16.81■□□□□ 0.28
APBA3-205ENST00000590064 UMODL1Q5DID0 1318 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 GIPC1O14908 333 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 CRCPO75575 148 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 VIL1P09327 827 aaKnown RBP16.8■□□□□ 0.28
APBA3-205ENST00000590064 NEK3P51956 506 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 EMC2Q15006 297 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 SURF1Q15526 300 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 ACBD5Q5T8D3 534 aaPredicted RBP16.8■□□□□ 0.28
APBA3-205ENST00000590064 POLNQ7Z5Q5 900 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 SLC7A6OSQ96CW6 309 aaPredicted RBP16.8■□□□□ 0.28
APBA3-205ENST00000590064 PRPF18Q99633 342 aaKnown RBP16.8■□□□□ 0.28
APBA3-205ENST00000590064 MRPL1Q9BYD6 325 aaKnown RBP16.8■□□□□ 0.28
APBA3-205ENST00000590064 GTSE1Q9NYZ3 720 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 SCAF8Q9UPN6 1271 aaKnown RBP16.8■□□□□ 0.28
APBA3-205ENST00000590064 CCDC78A2IDD5 438 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 DCXO43602 365 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 ANKRD22Q5VYY1 191 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 PDPK2PQ6A1A2 396 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 AGAP3Q96P47 875 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 GPR88Q9GZN0 384 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 TCRBV9S1A1TA0A576 114 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 POLD1P28340 1107 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 MTHFD1LQ6UB35 978 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 UBA3Q8TBC4 463 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 JADE3Q92613 823 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 SLCO2A1Q92959 643 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 ZBTB45Q96K62 511 aaPredicted RBP16.8■□□□□ 0.28
APBA3-205ENST00000590064 MMADHCQ9H3L0 296 aaPredicted RBP16.8■□□□□ 0.28
APBA3-205ENST00000590064 KCNQ5Q9NR82 932 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 CISHQ9NSE2 258 aa16.8■□□□□ 0.28
APBA3-205ENST00000590064 DRG1Q9Y295 367 aaKnown RBP16.8■□□□□ 0.28
APBA3-205ENST00000590064 hCG_1818297A0A087WSY0 165 aa16.79■□□□□ 0.28
APBA3-205ENST00000590064 AVILO75366 819 aa16.79■□□□□ 0.28
APBA3-205ENST00000590064 FDX1P10109 184 aa16.79■□□□□ 0.28
APBA3-205ENST00000590064 MCF2P10911 925 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms