RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ECT2Q9H8V3 914 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 KRT82Q9NSB4 513 aa15.19■□□□□ 0.02
RETREG3-208ENST00000589797 NOCTQ9UK39 431 aaKnown RBP15.19■□□□□ 0.02
RETREG3-208ENST00000589797 MYPNQ86TC9 1320 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 TJP1Q07157 1748 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 KPNA7A9QM74 516 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 PMPCBO75439 489 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 GPC4O75487 556 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 HMGCRP04035 888 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 AARSP49588 968 aaKnown RBP eCLIP15.18■□□□□ 0.02
RETREG3-208ENST00000589797 VCPP55072 806 aaKnown RBP15.18■□□□□ 0.02
RETREG3-208ENST00000589797 ASPHQ12797 758 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 USP50Q70EL3 339 aaPredicted RBP15.18■□□□□ 0.02
RETREG3-208ENST00000589797 ARMC2Q8NEN0 867 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 CYP4F11Q9HBI6 524 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 ABCF3Q9NUQ8 709 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 NINJ2Q9NZG7 142 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 PSMC3IPQ9P2W1 217 aaPredicted RBP15.18■□□□□ 0.02
RETREG3-208ENST00000589797 ETFBP38117 255 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 ELK3P41970 407 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 ABCG1P45844 678 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 TKTL1P51854 596 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 KDSRQ06136 332 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 DUPD1Q68J44 220 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 SLC25A41Q8N5S1 370 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 C1orf127Q8N9H9 656 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 IPMKQ8NFU5 416 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 ASB7Q9H672 318 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 GOLGA8TH3BQL2 631 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 SCAMP3O14828 347 aaKnown RBP15.18■□□□□ 0.02
RETREG3-208ENST00000589797 THP07101 528 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 TCF4P15884 667 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 RBL1P28749 1068 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 ARL2P36404 184 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 ARFIP2P53365 341 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 PKN2Q16513 984 aaKnown RBP15.18■□□□□ 0.02
RETREG3-208ENST00000589797 KYAT1Q16773 422 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 MGAT5BQ3V5L5 792 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 WSCD1Q658N2 575 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 C12orf56Q8IXR9 622 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 C3orf20Q8ND61 904 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 ZNF518BQ9C0D4 1074 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 AVENQ9NQS1 362 aaPredicted RBP15.18■□□□□ 0.02
RETREG3-208ENST00000589797 ZFP69BQ9UJL9 534 aa15.18■□□□□ 0.02
RETREG3-208ENST00000589797 NWD2Q9ULI1 1742 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 EPHB1P54762 984 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 CRLF3Q8IUI8 442 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 DEFB106AQ8N104 65 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 SGF29Q96ES7 293 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 VTA1Q9NP79 307 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 WHRNQ9P202 907 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 TNFSF13BQ9Y275 285 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 USP15Q9Y4E8 981 aaPredicted RBP15.17■□□□□ 0.02
RETREG3-208ENST00000589797 TPH1P17752 444 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 PMLP29590 882 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 MLH1P40692 756 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 STILQ15468 1287 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 MUM1Q2TAK8 710 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 PPP1R26Q5T8A7 1209 aaPredicted RBP15.17■□□□□ 0.02
RETREG3-208ENST00000589797 CCDC124Q96CT7 223 aaKnown RBP15.17■□□□□ 0.02
RETREG3-208ENST00000589797 HDAC11Q96DB2 347 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 KATNAL1Q9BW62 490 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 ATXN3LQ9H3M9 355 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 C4BP0C0L5 1744 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 AVILO75366 819 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 HSPA4LO95757 839 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 LSM8O95777 96 aaKnown RBP15.17■□□□□ 0.02
RETREG3-208ENST00000589797 CD48P09326 243 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 RGS2P41220 211 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 TSTA3Q13630 321 aaPredicted RBP15.17■□□□□ 0.02
RETREG3-208ENST00000589797 MTHFD1LQ6UB35 978 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 CRYGNQ8WXF5 182 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 ZNF669Q96BR6 464 aaPredicted RBP15.17■□□□□ 0.02
RETREG3-208ENST00000589797 WDCPQ9H6R7 721 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 KIF9Q9HAQ2 790 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 PAK5Q9P286 719 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 TUBGCP4Q9UGJ1 667 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 MROH7Q68CQ1 1323 aa15.17■□□□□ 0.02
RETREG3-208ENST00000589797 GYG2O15488 501 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 VNN1O95497 513 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 SERPINB6P35237 376 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 FSCN1Q16658 493 aaKnown RBP15.16■□□□□ 0.02
RETREG3-208ENST00000589797 GLB1LQ6UWU2 654 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 EPAS1Q99814 870 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 NTPCRQ9BSD7 190 aaKnown RBP15.16■□□□□ 0.02
RETREG3-208ENST00000589797 SARS2Q9NP81 518 aaKnown RBP15.16■□□□□ 0.02
RETREG3-208ENST00000589797 NCANO14594 1321 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 PTPRJQ12913 1337 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 UBR2Q8IWV8 1755 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 TREHO43280 583 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 PPFIA2O75334 1257 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 CYP2F1P24903 491 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 DCAF4L1Q3SXM0 396 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 TRPM8Q7Z2W7 1104 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 R3HDMLQ9H3Y0 253 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 NR2E3Q9Y5X4 410 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 CACNA1SQ13698 1873 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 SMIM10L2AP0DMW4 78 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 SMIM10L2BP0DMW5 78 aa15.16■□□□□ 0.02
RETREG3-208ENST00000589797 ATP4AP20648 1035 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms