RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 ATP8B3O60423 1300 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 LEFTY2O00292 366 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 SLC9A3R1O14745 358 aaPredicted RBP12.99□□□□□ -0.33
VAT1-206ENST00000589709 MAPK13O15264 365 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 RNF40O75150 1001 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 AKAP3O75969 853 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 RTN3O95197 1032 aaPredicted RBP12.99□□□□□ -0.33
VAT1-206ENST00000589709 KIF20AO95235 890 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 VNN1O95497 513 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 OAS1P00973 400 aaKnown RBP12.99□□□□□ -0.33
VAT1-206ENST00000589709 P4HA1P13674 534 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 CACNA2D1P54289 1103 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 CDH8P55286 799 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 KRT85P78386 507 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 ZXDBP98169 803 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 SPEM2Q0P670 501 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 SRSF5Q13243 272 aaKnown RBP12.99□□□□□ -0.33
VAT1-206ENST00000589709 CSRP2Q16527 193 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 CEP68Q76N32 757 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 SYT13Q7L8C5 426 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 PDZD8Q8NEN9 1154 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 GAB3Q8WWW8 586 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 OVCA2Q8WZ82 227 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 EZH1Q92800 747 aaPredicted RBP12.99□□□□□ -0.33
VAT1-206ENST00000589709 LOXL4Q96JB6 756 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 SMYD3Q9H7B4 428 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 COMMD8Q9NX08 183 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 IL37Q9NZH6 218 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 TRAF3IP3Q9Y228 551 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 PTPRDP23468 1912 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 ANAPC1Q9H1A4 1944 aa12.99□□□□□ -0.33
VAT1-206ENST00000589709 A0A1W2PQ27 194 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 A0A1W2PQ64 194 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 A0A1W2PQD8 194 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 CLDN5O00501 218 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 YWHAQP27348 245 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 HOXC13P31276 330 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 SYKP43405 635 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 ATXN1P54253 815 aaKnown RBP12.98□□□□□ -0.33
VAT1-206ENST00000589709 DLG4P78352 724 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 ENPEPQ07075 957 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 NFIL3Q16649 462 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 SNX30Q5VWJ9 437 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 NAIF1Q69YI7 327 aaPredicted RBP12.98□□□□□ -0.33
VAT1-206ENST00000589709 PAQR9Q6ZVX9 377 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 SV2AQ7L0J3 742 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.98□□□□□ -0.33
VAT1-206ENST00000589709 UNC93AQ86WB7 457 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 DDX42Q86XP3 938 aaKnown RBP eCLIP12.98□□□□□ -0.33
VAT1-206ENST00000589709 ADGRG2Q8IZP9 1017 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 CRYBG2Q8N1P7 616 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 FAM160A2Q8N612 972 aaPredicted RBP12.98□□□□□ -0.33
VAT1-206ENST00000589709 TTC16Q8NEE8 873 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 CCDC47Q96A33 483 aaKnown RBP12.98□□□□□ -0.33
VAT1-206ENST00000589709 ACDQ96AP0 544 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 RTKNQ9BST9 563 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 SCAND2PQ9GZW5 306 aaPredicted RBP12.98□□□□□ -0.33
VAT1-206ENST00000589709 SEMA4GQ9NTN9 838 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 CDV3Q9UKY7 258 aaKnown RBP12.98□□□□□ -0.33
VAT1-206ENST00000589709 FRMD4BQ9Y2L6 1034 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 CPQQ9Y646 472 aa12.98□□□□□ -0.33
VAT1-206ENST00000589709 MED19A0JLT2 244 aaPredicted RBP12.97□□□□□ -0.33
VAT1-206ENST00000589709 FAM92AA1XBS5 289 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 TNFRSF10BO14763 440 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 CALUO43852 315 aaPredicted RBP12.97□□□□□ -0.33
VAT1-206ENST00000589709 RPP40O75818 363 aaKnown RBP12.97□□□□□ -0.33
VAT1-206ENST00000589709 RHOBTB3O94955 611 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 ABL1P00519 1130 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 ASS1P00966 412 aaKnown RBP12.97□□□□□ -0.33
VAT1-206ENST00000589709 OPRD1P41143 372 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 NDUFA8P51970 172 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 MCCD1P59942 119 aaPredicted RBP12.97□□□□□ -0.33
VAT1-206ENST00000589709 GAB4Q2WGN9 574 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 C1orf220Q5T0J3 134 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 CACNA2D4Q7Z3S7 1137 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 FAM35AQ86V20 835 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 FUKQ8N0W3 1084 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 SMARCD1Q96GM5 515 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 ZC3H10Q96K80 434 aaKnown RBP12.97□□□□□ -0.33
VAT1-206ENST00000589709 KCNK16Q96T55 309 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 DUSP9Q99956 384 aaKnown RBP12.97□□□□□ -0.33
VAT1-206ENST00000589709 SDCBP2Q9H190 292 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 DMAP1Q9NPF5 467 aaPredicted RBP12.97□□□□□ -0.33
VAT1-206ENST00000589709 EBF1Q9UH73 591 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 ATP6V1DQ9Y5K8 247 aa12.97□□□□□ -0.33
VAT1-206ENST00000589709 E2F8A0AVK6 867 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 AXIN1O15169 862 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 ZDHHC11BP0C7U3 371 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 EIF2DP41214 584 aaKnown RBP12.96□□□□□ -0.33
VAT1-206ENST00000589709 RAP1GAPP47736 663 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 PXNP49023 591 aaPredicted RBP12.96□□□□□ -0.33
VAT1-206ENST00000589709 TUBP50607 506 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 DPYDQ12882 1025 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 DHCR24Q15392 516 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 HECTD3Q5T447 861 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 CEP135Q66GS9 1140 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 PRR23CQ6ZRP0 262 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 INTS8Q75QN2 995 aaKnown RBP12.96□□□□□ -0.33
VAT1-206ENST00000589709 FILIP1Q7Z7B0 1213 aa12.96□□□□□ -0.33
VAT1-206ENST00000589709 ACOT1Q86TX2 421 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms