RNA–Protein interactions for RNA: ENST00000586940.1

RFX2-206, Transcript of regulatory factor X2, human

TSL 3

Gene RFX2, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX2-206	ENST00000586940	HOXD12	P35452	270 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	GRIK1	P39086	918 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	EIF2D	P41214	584 aa	Known RBP	13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	MAGEA11	P43364	429 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	DUOXA1	Q1HG43	343 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	CRELD2	Q6UXH1	353 aa	Predicted RBP	13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	DENND5B	Q6ZUT9	1274 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	RABEPK	Q7Z6M1	372 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	FILIP1	Q7Z7B0	1213 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	PIP4P1	Q86T03	277 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	OSTM1	Q86WC4	334 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	CSGALNACT2	Q8N6G5	542 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	TOP6BL	Q8N6T0	577 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	FRMD1	Q8N878	549 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	KIAA1958	Q8N8K9	716 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	IL17RC	Q8NAC3	791 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	SYAP1	Q96A49	352 aa	Predicted RBP	13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	HVCN1	Q96D96	273 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	FIZ1	Q96SL8	496 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	PKMYT1	Q99640	499 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	FAM213A	Q9BRX8	229 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	ST6GALNAC4	Q9H4F1	302 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	MBD1	Q9UIS9	605 aa	Predicted RBP	13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	PILRB	Q9UKJ0	227 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	PCDHA7	Q9UN72	937 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	EXOC7	Q9UPT5	735 aa		13.42	□□□□□ -0.26
RFX2-206	ENST00000586940	ANTXRL	A6NF34	631 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	ADH1C	P00326	375 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	HNRNPL	P14866	589 aa	Known RBP eCLIP	13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	ITPKA	P23677	461 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	SLC6A11	P48066	632 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	RBP5	P82980	135 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	RPL6	Q02878	288 aa	Known RBP	13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	KDSR	Q06136	332 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	DHCR24	Q15392	516 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	ZNF423	Q2M1K9	1284 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	MAP7D1	Q3KQU3	841 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	SLC36A4	Q6YBV0	504 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	PROSER1	Q86XN7	944 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	ADGRG2	Q8IZP9	1017 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	CHCHD4	Q8N4Q1	142 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	C1orf127	Q8N9H9	656 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	SPATA17	Q96L03	361 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	SYT15	Q9BQS2	421 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	ARHGEF4	Q9NR80	690 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	GDAP2	Q9NXN4	497 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	STK17A	Q9UEE5	414 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	CCDC39	Q9UFE4	941 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	ITGA11	Q9UKX5	1188 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	SDK1	Q7Z5N4	2213 aa		13.41	□□□□□ -0.26
RFX2-206	ENST00000586940	CACNA1G	O43497	2377 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	TAF4	O00268	1085 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	GABRD	O14764	452 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	TRIM66	O15016	1216 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	ZBTB24	O43167	697 aa	Predicted RBP	13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	ABL1	P00519	1130 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	SYP	P08247	313 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	SERPINF2	P08697	491 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	TMEM191B	P0C7N4	346 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	ADH5	P11766	374 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	CMA1	P23946	247 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	TXLNA	P40222	546 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	GRIA2	P42262	883 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	TNFRSF4	P43489	277 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	PPP3CC	P48454	512 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	SLC7A9	P82251	487 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	CYP27A1	Q02318	531 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	MYO1E	Q12965	1108 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	MAPRE1	Q15691	268 aa	Known RBP	13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	CCDC142	Q17RM4	750 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	GAB4	Q2WGN9	574 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	PREPL	Q4J6C6	727 aa	Predicted RBP	13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	EMC10	Q5UCC4	262 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	PEAR1	Q5VY43	1037 aa	Predicted RBP	13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	RRAGB	Q5VZM2	374 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	CAVIN1	Q6NZI2	390 aa	Known RBP	13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	VSTM1	Q6UX27	236 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	ZNF720	Q7Z2F6	126 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	TRMT11	Q7Z4G4	463 aa	Known RBP	13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	DDX42	Q86XP3	938 aa	Known RBP eCLIP	13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	BRSK2	Q8IWQ3	736 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	NOC3L	Q8WTT2	800 aa	Known RBP	13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	MYLPF	Q96A32	169 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	SAAL1	Q96ER3	474 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	CEP295NL	Q96MC4	621 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	FSCN3	Q9NQT6	498 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	SMPD4	Q9NXE4	827 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	RBAK	Q9NYW8	714 aa	Predicted RBP	13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	CDH9	Q9ULB4	789 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	PCDHB9	Q9Y5E1	797 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	CPQ	Q9Y646	472 aa		13.4	□□□□□ -0.26
RFX2-206	ENST00000586940	CNOT1	A5YKK6	2376 aa	Known RBP	13.39	□□□□□ -0.27
RFX2-206	ENST00000586940	FAM221B	A6H8Z2	402 aa		13.39	□□□□□ -0.27
RFX2-206	ENST00000586940	HCRT	O43612	131 aa		13.39	□□□□□ -0.27
RFX2-206	ENST00000586940	BDNF	P23560	247 aa		13.39	□□□□□ -0.27
RFX2-206	ENST00000586940	ADSS	P30520	456 aa		13.39	□□□□□ -0.27
RFX2-206	ENST00000586940	KIR2DL1	P43626	348 aa	Predicted RBP	13.39	□□□□□ -0.27
RFX2-206	ENST00000586940	WNT7B	P56706	349 aa		13.39	□□□□□ -0.27
RFX2-206	ENST00000586940	PSMC1	P62191	440 aa	Known RBP	13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms