RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 SIM2Q14190 667 aaPredicted RBP18.03■□□□□ 0.48
TRIM47-203ENST00000586495 EML3Q32P44 896 aa18.03■□□□□ 0.48
TRIM47-203ENST00000586495 HEATR6Q6AI08 1181 aaKnown RBP18.03■□□□□ 0.48
TRIM47-203ENST00000586495 LAIR1Q6GTX8 287 aa18.03■□□□□ 0.48
TRIM47-203ENST00000586495 PRR23BQ6ZRT6 265 aa18.03■□□□□ 0.48
TRIM47-203ENST00000586495 INTS8Q75QN2 995 aaKnown RBP18.03■□□□□ 0.48
TRIM47-203ENST00000586495 FAM35AQ86V20 835 aa18.03■□□□□ 0.48
TRIM47-203ENST00000586495 GUF1Q8N442 669 aaKnown RBP18.03■□□□□ 0.48
TRIM47-203ENST00000586495 OVCA2Q8WZ82 227 aa18.03■□□□□ 0.48
TRIM47-203ENST00000586495 CD101Q93033 1021 aa18.03■□□□□ 0.48
TRIM47-203ENST00000586495 IMPG2Q9BZV3 1241 aa18.03■□□□□ 0.48
TRIM47-203ENST00000586495 SLC8A2Q9UPR5 921 aa18.03■□□□□ 0.48
TRIM47-203ENST00000586495 LEFTY2O00292 366 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 EGFP01133 1207 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 PIK3CAP42336 1068 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 CACNA2D1P54289 1103 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 ENPEPQ07075 957 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 DMWDQ09019 674 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 WDR5BQ86VZ2 330 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 UNC93AQ86WB7 457 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 DDX42Q86XP3 938 aaKnown RBP eCLIP18.02■□□□□ 0.48
TRIM47-203ENST00000586495 CCDC26Q8TAB7 109 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 FBXO32Q969P5 355 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 RMDN1Q96DB5 314 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 CHFRQ96EP1 664 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 SMARCD1Q96GM5 515 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 LINC00597Q9H2U6 94 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 DMAP1Q9NPF5 467 aaPredicted RBP18.02■□□□□ 0.48
TRIM47-203ENST00000586495 TMEM30AQ9NV96 361 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 COMMD8Q9NX08 183 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 MAPK8IP1Q9UQF2 711 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 CPQQ9Y646 472 aa18.02■□□□□ 0.48
TRIM47-203ENST00000586495 GPR179Q6PRD1 2367 aa18.01■□□□□ 0.47
TRIM47-203ENST00000586495 SLC9A3R1O14745 358 aaPredicted RBP18.01■□□□□ 0.47
TRIM47-203ENST00000586495 HRO43593 1189 aa18.01■□□□□ 0.47
TRIM47-203ENST00000586495 RNF40O75150 1001 aa18.01■□□□□ 0.47
TRIM47-203ENST00000586495 OLFM2O95897 454 aa18.01■□□□□ 0.47
TRIM47-203ENST00000586495 ASS1P00966 412 aaKnown RBP18.01■□□□□ 0.47
TRIM47-203ENST00000586495 OAS1P00973 400 aaKnown RBP18.01■□□□□ 0.47
TRIM47-203ENST00000586495 HLA-DRAP01903 254 aa18.01■□□□□ 0.47
TRIM47-203ENST00000586495 BECN1Q14457 450 aa18.01■□□□□ 0.47
TRIM47-203ENST00000586495 PUM1Q14671 1186 aaKnown RBP eCLIP18.01■□□□□ 0.47
TRIM47-203ENST00000586495 ACOT1Q86TX2 421 aa18.01■□□□□ 0.47
TRIM47-203ENST00000586495 CRYBG2Q8N1P7 616 aa18.01■□□□□ 0.47
TRIM47-203ENST00000586495 KCNK16Q96T55 309 aa18.01■□□□□ 0.47
TRIM47-203ENST00000586495 RNF38Q9H0F5 515 aa18.01■□□□□ 0.47
TRIM47-203ENST00000586495 SDCBP2Q9H190 292 aa18.01■□□□□ 0.47
TRIM47-203ENST00000586495 GOLPH3LQ9H4A5 285 aa18.01■□□□□ 0.47
TRIM47-203ENST00000586495 FBRSL1Q9HCM7 1045 aaKnown RBP18.01■□□□□ 0.47
TRIM47-203ENST00000586495 C2orf42Q9NWW7 574 aa18.01■□□□□ 0.47
TRIM47-203ENST00000586495 CCDC163A0A0D9SF12 145 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 AP1G2O75843 785 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 AKAP3O75969 853 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 RETP07949 1114 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 MBL2P11226 248 aaPredicted RBP18■□□□□ 0.47
TRIM47-203ENST00000586495 SDHBP21912 280 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 PSMC2P35998 433 aaKnown RBP18■□□□□ 0.47
TRIM47-203ENST00000586495 NDST1P52848 882 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 ZXDBP98169 803 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 ADAM9Q13443 819 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 LPAL2Q16609 132 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 PKN3Q6P5Z2 889 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 PAQR9Q6ZVX9 377 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 CEP68Q76N32 757 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 FAM186BQ8IYM0 893 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 CCDC150Q8NCX0 1101 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 ELMO3Q96BJ8 720 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 DNAI2Q9GZS0 605 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 GDPD2Q9HCC8 539 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 USP18Q9UMW8 372 aa18■□□□□ 0.47
TRIM47-203ENST00000586495 GOLGA6L4A6NEF3 574 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 PRR5-ARHGAP8B1AHC4 643 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 SLC5A3P53794 718 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 ARHGAP8P85298 464 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 LMNB2Q03252 620 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 EDRF1Q3B7T1 1238 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 C1orf220Q5T0J3 134 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 SPOPLQ6IQ16 392 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.99■□□□□ 0.47
TRIM47-203ENST00000586495 FUKQ8N0W3 1084 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 CAMKK1Q8N5S9 505 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 ACDQ96AP0 544 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 FBXO44Q9H4M3 255 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 CYP3A43Q9HB55 503 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 KRT82Q9NSB4 513 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 SMPD4Q9NXE4 827 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 IL37Q9NZH6 218 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 TBC1D14Q9P2M4 693 aa17.99■□□□□ 0.47
TRIM47-203ENST00000586495 CHORDC1Q9UHD1 332 aaPredicted RBP17.99■□□□□ 0.47
TRIM47-203ENST00000586495 SPTBN4Q9H254 2564 aa17.98■□□□□ 0.47
TRIM47-203ENST00000586495 HELZP42694 1942 aaKnown RBP17.98■□□□□ 0.47
TRIM47-203ENST00000586495 TNFRSF10BO14763 440 aa17.98■□□□□ 0.47
TRIM47-203ENST00000586495 LRP3O75074 770 aa17.98■□□□□ 0.47
TRIM47-203ENST00000586495 TRIM49P0CI25 452 aa17.98■□□□□ 0.47
TRIM47-203ENST00000586495 TRIM49CP0CI26 452 aa17.98■□□□□ 0.47
TRIM47-203ENST00000586495 ASPAP45381 313 aa17.98■□□□□ 0.47
TRIM47-203ENST00000586495 GCLMP48507 274 aa17.98■□□□□ 0.47
TRIM47-203ENST00000586495 TUBP50607 506 aa17.98■□□□□ 0.47
TRIM47-203ENST00000586495 SRSF5Q13243 272 aaKnown RBP17.98■□□□□ 0.47
TRIM47-203ENST00000586495 HECTD3Q5T447 861 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms