RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 TMC8Q8IU68 726 aa9.92□□□□□ -0.82
SDF2-203ENST00000585749 ARID3BQ8IVW6 561 aaPredicted RBP9.92□□□□□ -0.82
SDF2-203ENST00000585749 FMR1NBQ8N0W7 255 aaPredicted RBP9.92□□□□□ -0.82
SDF2-203ENST00000585749 ANKRD36BP1Q96IX9 119 aa9.92□□□□□ -0.82
SDF2-203ENST00000585749 BBC3Q96PG8 261 aaPredicted RBP9.92□□□□□ -0.82
SDF2-203ENST00000585749 HHIPQ96QV1 700 aa9.92□□□□□ -0.82
SDF2-203ENST00000585749 TMEM209Q96SK2 561 aa9.92□□□□□ -0.82
SDF2-203ENST00000585749 MKNK1Q9BUB5 465 aa9.92□□□□□ -0.82
SDF2-203ENST00000585749 KCTD10Q9H3F6 313 aa9.92□□□□□ -0.82
SDF2-203ENST00000585749 CHMP5Q9NZZ3 219 aa9.92□□□□□ -0.82
SDF2-203ENST00000585749 CACNA1EQ15878 2313 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 KIAA1549LQ6ZVL6 1849 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 PCNX2A6NKB5 2137 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 ABCA7Q8IZY2 2146 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 FAM221BA6H8Z2 402 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 GOLGA6L4A6NEF3 574 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 PATE3B3GLJ2 98 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 PDXKO00764 312 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 CYB561D2O14569 222 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 KHNYNO15037 678 aaKnown RBP9.91□□□□□ -0.82
SDF2-203ENST00000585749 ATG13O75143 517 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 PRPF40AO75400 957 aaKnown RBP9.91□□□□□ -0.82
SDF2-203ENST00000585749 KIF20AO95235 890 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 TNNC2P02585 160 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 RBP5P82980 135 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 FAM160A1Q05DH4 1040 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 DUOXA2Q1HG44 320 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 COL28A1Q2UY09 1125 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 TMEM196Q5HYL7 178 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 LMBRD2Q68DH5 695 aaPredicted RBP9.91□□□□□ -0.82
SDF2-203ENST00000585749 FSTL4Q6MZW2 842 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 C19orf48Q6RUI8 117 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 RNF19BQ6ZMZ0 732 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 METTL23Q86XA0 190 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 SLC9A9Q8IVB4 645 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 CSGALNACT2Q8N6G5 542 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 OR5B17Q8NGF7 314 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 OR10T2Q8NGX3 314 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 SPATA18Q8TC71 538 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 CHFRQ96EP1 664 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 CGRRF1Q99675 332 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 GDAP2Q9NXN4 497 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 OBP2AQ9NY56 170 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 HSFX1Q9UBD0 423 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 SIX4Q9UIU6 781 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 AGAP1Q9UPQ3 857 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 YIPF1Q9Y548 306 aa9.91□□□□□ -0.82
SDF2-203ENST00000585749 THADAQ6YHU6 1953 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 MYO16Q9Y6X6 1858 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 MTMR11A4FU01 709 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 EXOC3O60645 756 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 HUS1O60921 280 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 VNN2O95498 520 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 KRT19P08727 400 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 OR4Q2P0C623 313 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 DLATP10515 647 aaKnown RBP9.9□□□□□ -0.82
SDF2-203ENST00000585749 IRX4P78413 519 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 SMARCB1Q12824 385 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 BFSP1Q12934 665 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 MYO1EQ12965 1108 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 PLD1Q13393 1074 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 NFIL3Q16649 462 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 UAP1L1Q3KQV9 507 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 WSCD1Q658N2 575 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 PMS2CLQ68D20 193 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 THEM5Q8N1Q8 247 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 TMEM86AQ8N2M4 240 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 GUF1Q8N442 669 aaKnown RBP9.9□□□□□ -0.82
SDF2-203ENST00000585749 RDH13Q8NBN7 331 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 ENGASEQ8NFI3 743 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 C2orf15Q8WU43 125 aaKnown RBP9.9□□□□□ -0.82
SDF2-203ENST00000585749 ZNF516Q92618 1163 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 FAM84AQ96KN4 292 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 FNBP1Q96RU3 617 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 ZCWPW1Q9H0M4 648 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 GZF1Q9H116 711 aaPredicted RBP9.9□□□□□ -0.82
SDF2-203ENST00000585749 DNAJC25Q9H1X3 360 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 DMAC2Q9NW81 257 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 L1RE1Q9UN81 338 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 TRAF3IP3Q9Y228 551 aa9.9□□□□□ -0.82
SDF2-203ENST00000585749 R3HCC1Q9Y3T6 440 aaKnown RBP9.9□□□□□ -0.82
SDF2-203ENST00000585749 BPTFQ12830 3046 aa9.9□□□□□ -0.83
SDF2-203ENST00000585749 SPAARA0A1B0GVQ0 90 aa9.89□□□□□ -0.83
SDF2-203ENST00000585749 TRDMT1O14717 391 aaKnown RBP9.89□□□□□ -0.83
SDF2-203ENST00000585749 CALUO43852 315 aaPredicted RBP9.89□□□□□ -0.83
SDF2-203ENST00000585749 PRAMEF12O95522 483 aa9.89□□□□□ -0.83
SDF2-203ENST00000585749 EGFP01133 1207 aa9.89□□□□□ -0.83
SDF2-203ENST00000585749 NR3C1P04150 777 aa9.89□□□□□ -0.83
SDF2-203ENST00000585749 TNNI1P19237 187 aa9.89□□□□□ -0.83
SDF2-203ENST00000585749 GBP1P32455 592 aa9.89□□□□□ -0.83
SDF2-203ENST00000585749 AP3M2P53677 418 aa9.89□□□□□ -0.83
SDF2-203ENST00000585749 CLDN10P78369 228 aa9.89□□□□□ -0.83
SDF2-203ENST00000585749 GRSF1Q12849 480 aaKnown RBP eCLIP9.89□□□□□ -0.83
SDF2-203ENST00000585749 DUSP4Q13115 394 aa9.89□□□□□ -0.83
SDF2-203ENST00000585749 ITPRIPL2Q3MIP1 535 aa9.89□□□□□ -0.83
SDF2-203ENST00000585749 CENPPQ6IPU0 288 aa9.89□□□□□ -0.83
SDF2-203ENST00000585749 GAREM2Q75VX8 874 aa9.89□□□□□ -0.83
SDF2-203ENST00000585749 DPH6Q7L8W6 267 aa9.89□□□□□ -0.83
SDF2-203ENST00000585749 TRAPPC11Q7Z392 1133 aa9.89□□□□□ -0.83
SDF2-203ENST00000585749 PDCL2Q8N4E4 241 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms