RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 KBTBD12Q3ZCT8 623 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 LRRC6Q86X45 466 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 RNF217Q8TC41 542 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 MCRS1Q96EZ8 462 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 NAF1Q96HR8 494 aaKnown RBP14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 APOPT1Q96IL0 206 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SERAC1Q96JX3 654 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 MIPEPQ99797 713 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 C2orf40Q9H1Z8 148 aa14.83□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ANK1P16157 1881 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ENDOD1O94919 500 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 LUC7L3O95232 432 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 GABRB2P47870 512 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 GMPSP49915 693 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 OSTNP61366 133 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ZNF200P98182 395 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 KCNJ11Q14654 390 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ZNF667Q5HYK9 610 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 METTL7BQ6UX53 244 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SLC4A11Q8NBS3 891 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 FBXO41Q8TF61 875 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CAMKK2Q96RR4 588 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 KCNK13Q9HB14 408 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ALG13Q9NP73 1137 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 HEY2Q9UBP5 337 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SIX4Q9UIU6 781 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 IKBKGQ9Y6K9 419 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 MGAMO43451 1857 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 IGKV6-21A0A0C4DH24 114 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ZBTB42B2RXF5 422 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 KBTBD13C9JR72 458 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ACKR2O00590 384 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 LIN7AO14910 233 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CCDC22O60826 627 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 DNAJC6O75061 913 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ENTPD5O75356 428 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SPAG6O75602 509 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 KRT19P08727 400 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TGFB3P10600 412 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PCK1P35558 622 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ROR1Q01973 937 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 EN1Q05925 392 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CBLBQ13191 982 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PRKD1Q15139 912 aaPredicted RBP14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 NOMO1Q15155 1222 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ATF7IP2Q5U623 682 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 WDR78Q5VTH9 848 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 LRRC71Q8N4P6 559 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PTCD3Q96EY7 689 aaKnown RBP14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 FAXDC2Q96IV6 333 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TUBB6Q9BUF5 446 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SDCBP2Q9H190 292 aa14.82□□□□□ -0.04
CDK5RAP3-237ENST00000585163 HAUS5O94927 633 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 IL1BP01584 269 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 INHBAP08476 426 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PAX7P23759 505 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ARFIP2P53365 341 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PTPN11Q06124 597 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 FAAP100Q0VG06 881 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ORC1Q13415 861 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 BLMHQ13867 455 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ZNF772Q68DY9 489 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 DARS2Q6PI48 645 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SKA1Q96BD8 255 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 KLRG1Q96E93 195 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 FAM111AQ96PZ2 611 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TWNKQ96RR1 684 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PEBP4Q96S96 227 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CADM1Q9BY67 442 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 FZD8Q9H461 694 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ASNSD1Q9NWL6 643 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PIM2Q9P1W9 311 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CNTN3Q9P232 1028 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 MTO1Q9Y2Z2 717 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CHADO15335 359 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 DLDP09622 509 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CDC25CP30307 473 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ZNF143P52747 638 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 MMRN1Q13201 1228 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 NPNTQ6UXI9 565 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 C4orf50Q6ZRC1 276 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ZC3H18Q86VM9 953 aaKnown RBP14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TTC8Q8TAM2 541 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 BTBD10Q9BSF8 475 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 TRIM6Q9C030 488 aaPredicted RBP14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 DCLRE1BQ9H816 532 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PNPLA8Q9NP80 782 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ARL8BQ9NVJ2 186 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 HMGXB4Q9UGU5 601 aa14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.81□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CFAP69A5D8W1 941 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SOWAHBA6NEL2 793 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 B4GALT5O43286 388 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 SMNDC1O75940 238 aaKnown RBP eCLIP14.8□□□□□ -0.042e-22■□□□□ 9.5
CDK5RAP3-237ENST00000585163 MICAL2O94851 1124 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 LMNAP02545 664 aaKnown RBP14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 CXCL8P10145 99 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 PYGBP11216 843 aa14.8□□□□□ -0.04
CDK5RAP3-237ENST00000585163 ABL2P42684 1182 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms