RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 ABRAQ8N0Z2 381 aa6.63□□□□□ -1.35
SMARCE1-219ENST00000583294 IPO4Q8TEX9 1081 aaKnown RBP6.63□□□□□ -1.35
SMARCE1-219ENST00000583294 TFAP2BQ92481 460 aa6.63□□□□□ -1.35
SMARCE1-219ENST00000583294 GLG1Q92896 1179 aa6.63□□□□□ -1.35
SMARCE1-219ENST00000583294 ADGRA2Q96PE1 1338 aa6.63□□□□□ -1.35
SMARCE1-219ENST00000583294 C17orf80Q9BSJ5 609 aa6.63□□□□□ -1.35
SMARCE1-219ENST00000583294 PPCSQ9HAB8 311 aa6.63□□□□□ -1.35
SMARCE1-219ENST00000583294 DKK3Q9UBP4 350 aa6.63□□□□□ -1.35
SMARCE1-219ENST00000583294 ZMYND8Q9ULU4 1186 aaPredicted RBP6.63□□□□□ -1.35
SMARCE1-219ENST00000583294 IFRD1O00458 451 aaPredicted RBP6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 HNRNPDLO14979 420 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 FFAR2O15552 330 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 FZD7O75084 574 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 TCEA3O75764 348 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 LMNAP02545 664 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 UQCRC1P31930 480 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 PGDP52209 483 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 PUM3Q15397 648 aaKnown RBP6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 RAB30Q15771 203 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 FAXCQ5TGI0 409 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 RAP1GAP2Q684P5 730 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 SLC9A4Q6AI14 798 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 KIAA0408Q6ZU52 694 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 DTX2Q86UW9 622 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 CCDC28AQ8IWP9 274 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 EXOC8Q8IYI6 725 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 IZUMO1Q8IYV9 350 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 PGBD1Q96JS3 809 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 POLR3GLQ9BT43 218 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 CYP4F11Q9HBI6 524 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 GLOD4Q9HC38 313 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 HS3ST3A1Q9Y663 406 aa6.62□□□□□ -1.35
SMARCE1-219ENST00000583294 A1L4Q6 167 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 AGPSO00116 658 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 PROM1O43490 865 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 COQ9O75208 318 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 ADH4P08319 380 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 HKR1P10072 659 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 HMGA2P52926 109 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 BCAT1P54687 386 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 TUBB8Q3ZCM7 444 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 ARHGAP15Q53QZ3 475 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 TREML2Q5T2D2 321 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 GORABQ5T7V8 394 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 ERAP2Q6P179 960 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 Q6ZNX1 250 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 CYP2W1Q8TAV3 490 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 CAVIN3Q969G5 261 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 R3HDM4Q96D70 268 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 HIST1H2AAQ96QV6 131 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 MRIQ9BWK5 157 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 KRTAP17-1Q9BYP8 105 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 SLC25A32Q9H2D1 315 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 OBP2BQ9NPH6 170 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 TM7SF3Q9NS93 570 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 KLC4Q9NSK0 619 aa6.61□□□□□ -1.35
SMARCE1-219ENST00000583294 AQP12BA6NM10 295 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 ADM5C9JUS6 153 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 CYR61O00622 381 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 PIP5K1BO14986 540 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 SLC16A3O15427 465 aaKnown RBP6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 KCNQ3O43525 872 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 TLR5O60602 858 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 NBNO60934 754 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 FESP07332 822 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 NR2F6P10588 404 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 PECAM1P16284 738 aaPredicted RBP6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 CHKAP35790 457 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 LIPAP38571 399 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 FOLR3P41439 243 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 GATMP50440 423 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 ATXN1P54253 815 aaKnown RBP6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 ICA1Q05084 483 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 Q6YL49 198 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 C11orf44Q8N8P7 122 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 XAGE5Q8WWM1 108 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 MYH16Q9H6N6 1097 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 ZBTB26Q9HCK0 441 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 IGSF9Q9P2J2 1179 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 DNAJB11Q9UBS4 358 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 USP22Q9UPT9 525 aa6.6□□□□□ -1.35
SMARCE1-219ENST00000583294 ZAR1LA6NP61 321 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 SUV39H1O43463 412 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 EPHA3P29320 983 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 PDIA3P30101 505 aaKnown RBP6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 MTHFSP49914 203 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 PTPRRQ15256 657 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 MAPKAPK3Q16644 382 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 TXNRD1Q16881 649 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 CCDC38Q502W7 563 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 TMTC4Q5T4D3 741 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 ANO1Q5XXA6 986 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 KAZNQ674X7 775 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 MZT2AQ6P582 158 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 USP17L6PQ6QN14 398 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 CLEC9AQ6UXN8 241 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 ZNF627Q7L945 461 aa6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 CAND1Q86VP6 1230 aaKnown RBP6.59□□□□□ -1.35
SMARCE1-219ENST00000583294 SMC5Q8IY18 1101 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms