RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 TNFRSF25Q93038 417 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 IFT74Q96LB3 600 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 MTMR9Q96QG7 549 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 PNKPQ96T60 521 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 NAP1L4Q99733 375 aaKnown RBP8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 CDC6Q99741 560 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 MRPL4Q9BYD3 311 aaKnown RBP8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 ZDHHC5Q9C0B5 715 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 TMEM134Q9H6X4 195 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 TRPC7Q9HCX4 862 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 TUFT1Q9NNX1 390 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 ABI2Q9NYB9 513 aaPredicted RBP8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 ARHGAP28Q9P2N2 729 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 SUSD2Q9UGT4 822 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 CYP8B1Q9UNU6 501 aa8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 TP53BP1Q12888 1972 aaPredicted RBP8.29□□□□□ -1.08
SMARCE1-217ENST00000580654 TRAV19A0A0A6YYK7 116 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 A0A1B0GTW7 788 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 ARHGEF35A5YM69 484 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 TRIM66O15016 1216 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 FLRT2O43155 660 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 DTNBO60941 627 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 NOL4O94818 638 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 APODP05090 189 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 CKMP06732 381 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 CSH1P0DML2 217 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 CSH2P0DML3 217 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 ODC1P11926 461 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 TNFSF9P41273 254 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 TNFRSF4P43489 277 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 NPTX2P47972 431 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 CXADRP78310 365 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 SEMG2Q02383 582 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 TLE3Q04726 772 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 LY6DQ14210 128 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 DHCR24Q15392 516 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 SAFBQ15424 915 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 CALCRLQ16602 461 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 HLA-BQ31612 363 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 COLEC12Q5KU26 742 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 RHBDF2Q6PJF5 856 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 BLOC1S3Q6QNY0 202 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 FILIP1Q7Z7B0 1213 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 ADGRG2Q8IZP9 1017 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 DAW1Q8N136 415 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 ZCCHC9Q8N567 271 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 SNIP1Q8TAD8 396 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 SPATA18Q8TC71 538 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 DNASE2BQ8WZ79 361 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 KCNB2Q92953 911 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 NXPE2Q96DL1 559 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 ERLEC1Q96DZ1 483 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 WBP1Q96G27 269 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 TRMT2BQ96GJ1 504 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 MYRFLQ96LU7 910 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 JAKMIP1Q96N16 626 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 KIF2CQ99661 725 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 TCHPQ9BT92 498 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 SLC6A17Q9H1V8 727 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 ARHGEF4Q9NR80 690 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 GMIPQ9P107 970 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 GMPR2Q9P2T1 348 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 UBQLN1Q9UMX0 589 aaKnown RBP8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 ARHGAP26Q9UNA1 814 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 PCDHGB2Q9Y5G2 931 aa8.28□□□□□ -1.08
SMARCE1-217ENST00000580654 FLNCQ14315 2725 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 MYMKA6NI61 221 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 CCDC169A6NNP5 214 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 LACTBL1A8MY62 500 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 BTBD18B2RXH4 712 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 LEFTY2O00292 366 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 SCAMP3O14828 347 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 RRP8O43159 456 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 TNFSF14O43557 240 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 S1PR4O95977 384 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 AVPP01185 164 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 KRT10P13645 584 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 HOXB2P14652 356 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 GNSP15586 552 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 RPS6KB1P23443 525 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 EIF2DP41214 584 aaKnown RBP8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 GRIA2P42262 883 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 MATKP42679 507 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 WASP42768 502 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 PEX3P56589 373 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 NR5A1Q13285 461 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 TOB2Q14106 344 aaPredicted RBP8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 NOLC1Q14978 699 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 ECM1Q16610 540 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 DDR2Q16832 855 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 TAF1BQ53T94 588 aaPredicted RBP8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 TMPRSS12Q86WS5 348 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 C1orf216Q8TAB5 229 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 KIFAP3Q92845 792 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 ACOX2Q99424 681 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 TMEM60Q9H2L4 133 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 PLEKHA5Q9HAU0 1116 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 SLCO1B1Q9Y6L6 691 aa8.27□□□□□ -1.09
SMARCE1-217ENST00000580654 DOPEY1Q5JWR5 2465 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms