RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 CCDC195A0A1B0GUA6 201 aa15.05■□□□□ -0
SKA2-205ENST00000580541 MYBL1P10243 752 aa15.05■□□□□ -0
SKA2-205ENST00000580541 UNGP13051 313 aaPredicted RBP15.05■□□□□ -0
SKA2-205ENST00000580541 SSTR3P32745 418 aaPredicted RBP15.05■□□□□ -0
SKA2-205ENST00000580541 KIF11P52732 1056 aa15.05■□□□□ -0
SKA2-205ENST00000580541 NOMO3P69849 1222 aa15.05■□□□□ -0
SKA2-205ENST00000580541 KRT83P78385 493 aa15.05■□□□□ -0
SKA2-205ENST00000580541 CENPCQ03188 943 aa15.05■□□□□ -0
SKA2-205ENST00000580541 ITIH3Q06033 890 aa15.05■□□□□ -0
SKA2-205ENST00000580541 PDCLQ13371 301 aa15.05■□□□□ -0
SKA2-205ENST00000580541 KCNC3Q14003 757 aa15.05■□□□□ -0
SKA2-205ENST00000580541 CCDC142Q17RM4 750 aa15.05■□□□□ -0
SKA2-205ENST00000580541 CCDC122Q5T0U0 273 aa15.05■□□□□ -0
SKA2-205ENST00000580541 CYP4A22Q5TCH4 519 aa15.05■□□□□ -0
SKA2-205ENST00000580541 CES5AQ6NT32 575 aa15.05■□□□□ -0
SKA2-205ENST00000580541 PMF1Q6P1K2 205 aa15.05■□□□□ -0
SKA2-205ENST00000580541 DNAJB7Q7Z6W7 309 aaPredicted RBP15.05■□□□□ -0
SKA2-205ENST00000580541 PHF13Q86YI8 300 aaPredicted RBP15.05■□□□□ -0
SKA2-205ENST00000580541 GPIHBP1Q8IV16 184 aa15.05■□□□□ -0
SKA2-205ENST00000580541 SCML4Q8N228 414 aa15.05■□□□□ -0
SKA2-205ENST00000580541 MICALL1Q8N3F8 863 aa15.05■□□□□ -0
SKA2-205ENST00000580541 C1orf131Q8NDD1 294 aaKnown RBP15.05■□□□□ -0
SKA2-205ENST00000580541 PDZD8Q8NEN9 1154 aa15.05■□□□□ -0
SKA2-205ENST00000580541 CPA5Q8WXQ8 436 aa15.05■□□□□ -0
SKA2-205ENST00000580541 PABPC5Q96DU9 382 aaKnown RBP15.05■□□□□ -0
SKA2-205ENST00000580541 SLITRK1Q96PX8 696 aa15.05■□□□□ -0
SKA2-205ENST00000580541 SLC4A5Q9BY07 1137 aa15.05■□□□□ -0
SKA2-205ENST00000580541 CRISPLD1Q9H336 500 aa15.05■□□□□ -0
SKA2-205ENST00000580541 MTMR10Q9NXD2 777 aa15.05■□□□□ -0
SKA2-205ENST00000580541 ADAM22Q9P0K1 906 aa15.05■□□□□ -0
SKA2-205ENST00000580541 EPN1Q9Y6I3 576 aaPredicted RBP15.05■□□□□ -0
SKA2-205ENST00000580541 COL4A4P53420 1690 aaPredicted RBP15.05■□□□□ -0
SKA2-205ENST00000580541 CHD9Q3L8U1 2897 aa15.05■□□□□ -0
SKA2-205ENST00000580541 CHD7Q9P2D1 2997 aa15.04■□□□□ -0
SKA2-205ENST00000580541 SLC38A8A6NNN8 435 aa15.04■□□□□ -0
SKA2-205ENST00000580541 DDX3XO00571 662 aaKnown RBP eCLIP15.04■□□□□ -0
SKA2-205ENST00000580541 ZNF197O14709 1029 aa15.04■□□□□ -0
SKA2-205ENST00000580541 ARHGAP6O43182 974 aa15.04■□□□□ -0
SKA2-205ENST00000580541 BEST1O76090 585 aa15.04■□□□□ -0
SKA2-205ENST00000580541 FTLP02792 175 aaPredicted RBP15.04■□□□□ -0
SKA2-205ENST00000580541 PLEKP08567 350 aaPredicted RBP15.04■□□□□ -0
SKA2-205ENST00000580541 GABRB2P47870 512 aa15.04■□□□□ -0
SKA2-205ENST00000580541 RPL34P49207 117 aaKnown RBP15.04■□□□□ -0
SKA2-205ENST00000580541 PSEN1P49768 467 aa15.04■□□□□ -0
SKA2-205ENST00000580541 TKTL1P51854 596 aa15.04■□□□□ -0
SKA2-205ENST00000580541 CDR1P51861 262 aa15.04■□□□□ -0
SKA2-205ENST00000580541 SLC5A3P53794 718 aa15.04■□□□□ -0
SKA2-205ENST00000580541 ZNF268Q14587 947 aaPredicted RBP15.04■□□□□ -0
SKA2-205ENST00000580541 RAB41Q5JT25 222 aa15.04■□□□□ -0
SKA2-205ENST00000580541 ANKRD54Q6NXT1 300 aa15.04■□□□□ -0
SKA2-205ENST00000580541 EP400NLQ6ZTU2 488 aa15.04■□□□□ -0
SKA2-205ENST00000580541 Q7L0L9 218 aa15.04■□□□□ -0
SKA2-205ENST00000580541 WDTC1Q8N5D0 677 aa15.04■□□□□ -0
SKA2-205ENST00000580541 TTC9BQ8N6N2 239 aa15.04■□□□□ -0
SKA2-205ENST00000580541 ZMIZ2Q8NF64 920 aa15.04■□□□□ -0
SKA2-205ENST00000580541 GIPC2Q8TF65 315 aa15.04■□□□□ -0
SKA2-205ENST00000580541 MYLIPQ8WY64 445 aa15.04■□□□□ -0
SKA2-205ENST00000580541 OVCA2Q8WZ82 227 aa15.04■□□□□ -0
SKA2-205ENST00000580541 IRGQQ8WZA9 623 aa15.04■□□□□ -0
SKA2-205ENST00000580541 TRMT2BQ96GJ1 504 aaKnown RBP15.04■□□□□ -0
SKA2-205ENST00000580541 MYRFLQ96LU7 910 aa15.04■□□□□ -0
SKA2-205ENST00000580541 GCNAQ96QF7 691 aa15.04■□□□□ -0
SKA2-205ENST00000580541 PCDHB18PQ96TA0 734 aa15.04■□□□□ -0
SKA2-205ENST00000580541 ASAH2Q9NR71 780 aa15.04■□□□□ -0
SKA2-205ENST00000580541 CLDND1Q9NY35 253 aa15.04■□□□□ -0
SKA2-205ENST00000580541 NAGPAQ9UK23 515 aa15.04■□□□□ -0
SKA2-205ENST00000580541 SCML2Q9UQR0 700 aa15.04■□□□□ -0
SKA2-205ENST00000580541 A0A087X0T9 212 aa15.03■□□□□ -0
SKA2-205ENST00000580541 EIF3CLB5ME19 914 aaKnown RBP15.03■□□□□ -0
SKA2-205ENST00000580541 HHLA1C9JL84 531 aa15.03■□□□□ -0
SKA2-205ENST00000580541 TNFRSF10BO14763 440 aa15.03■□□□□ -0
SKA2-205ENST00000580541 CCL16O15467 120 aa15.03■□□□□ -0
SKA2-205ENST00000580541 SOAT2O75908 522 aa15.03■□□□□ -0
SKA2-205ENST00000580541 PAPLNO95428 1278 aa15.03■□□□□ -0
SKA2-205ENST00000580541 ZBED1O96006 694 aa15.03■□□□□ -0
SKA2-205ENST00000580541 CFHP08603 1231 aa15.03■□□□□ -0
SKA2-205ENST00000580541 FAM228BP0C875 321 aa15.03■□□□□ -0
SKA2-205ENST00000580541 LCP1P13796 627 aa15.03■□□□□ -0
SKA2-205ENST00000580541 ATF6P18850 670 aa15.03■□□□□ -0
SKA2-205ENST00000580541 MMP8P22894 467 aa15.03■□□□□ -0
SKA2-205ENST00000580541 RGS7P49802 495 aa15.03■□□□□ -0
SKA2-205ENST00000580541 CACNA2D1P54289 1103 aa15.03■□□□□ -0
SKA2-205ENST00000580541 CTC1Q2NKJ3 1217 aa15.03■□□□□ -0
SKA2-205ENST00000580541 ASTE1Q2TB18 679 aaPredicted RBP15.03■□□□□ -0
SKA2-205ENST00000580541 EFHC1Q5JVL4 640 aa15.03■□□□□ -0
SKA2-205ENST00000580541 ATAT1Q5SQI0 421 aa15.03■□□□□ -0
SKA2-205ENST00000580541 TOGARAM2Q6ZUX3 1019 aa15.03■□□□□ -0
SKA2-205ENST00000580541 TADA2BQ86TJ2 420 aa15.03■□□□□ -0
SKA2-205ENST00000580541 MON1AQ86VX9 555 aa15.03■□□□□ -0
SKA2-205ENST00000580541 STKLD1Q8NE28 680 aa15.03■□□□□ -0
SKA2-205ENST00000580541 VN1R2Q8NFZ6 395 aa15.03■□□□□ -0
SKA2-205ENST00000580541 EIF3CQ99613 913 aaKnown RBP15.03■□□□□ -0
SKA2-205ENST00000580541 TTLL2Q9BWV7 592 aa15.03■□□□□ -0
SKA2-205ENST00000580541 ISCUQ9H1K1 167 aa15.03■□□□□ -0
SKA2-205ENST00000580541 TLR8Q9NR97 1041 aaKnown RBP15.03■□□□□ -0
SKA2-205ENST00000580541 TMEM51Q9NW97 253 aa15.03■□□□□ -0
SKA2-205ENST00000580541 IL37Q9NZH6 218 aa15.03■□□□□ -0
SKA2-205ENST00000580541 ZMYM5Q9UJ78 669 aa15.03■□□□□ -0
SKA2-205ENST00000580541 INTUQ9ULD6 942 aa15.03■□□□□ -0
SKA2-205ENST00000580541 MAGED2Q9UNF1 606 aaPredicted RBP15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms