RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 PLEKHA7Q6IQ23 1121 aa11.31□□□□□ -0.6
SS18-213ENST00000579640 RTL10Q7L3V2 364 aa11.31□□□□□ -0.6
SS18-213ENST00000579640 XYLT1Q86Y38 959 aa11.31□□□□□ -0.6
SS18-213ENST00000579640 DNAAF5Q86Y56 855 aa11.31□□□□□ -0.6
SS18-213ENST00000579640 TCEAL8Q8IYN2 117 aa11.31□□□□□ -0.6
SS18-213ENST00000579640 SIX6OS1Q8N1H7 587 aa11.31□□□□□ -0.6
SS18-213ENST00000579640 SCML4Q8N228 414 aa11.31□□□□□ -0.6
SS18-213ENST00000579640 MCRS1Q96EZ8 462 aa11.31□□□□□ -0.6
SS18-213ENST00000579640 KCNK16Q96T55 309 aa11.31□□□□□ -0.6
SS18-213ENST00000579640 SEPT5Q99719 369 aaPredicted RBP11.31□□□□□ -0.6
SS18-213ENST00000579640 CNGB3Q9NQW8 809 aa11.31□□□□□ -0.6
SS18-213ENST00000579640 TMEM30AQ9NV96 361 aa11.31□□□□□ -0.6
SS18-213ENST00000579640 COMMD8Q9NX08 183 aa11.31□□□□□ -0.6
SS18-213ENST00000579640 TMEM265A0A087WTH1 108 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 HIDE1A8MVS5 230 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 MTA2O94776 668 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 TKTL1P51854 596 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 HADHBP55084 474 aaKnown RBP11.3□□□□□ -0.6
SS18-213ENST00000579640 PLD1Q13393 1074 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 PTPROQ16827 1216 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 CYP4A22Q5TCH4 519 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 OR6B2Q6IFH4 312 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 DNAJC24Q6P3W2 148 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 LILRA6Q6PI73 481 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 ARHGEF26Q96DR7 871 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 CERS4Q9HA82 394 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 CYP4F11Q9HBI6 524 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 LZTFL1Q9NQ48 299 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 EHD2Q9NZN4 543 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 CTTNBP2NLQ9P2B4 639 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 MYO1AQ9UBC5 1043 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 LCMT1Q9UIC8 334 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 SLC27A5Q9Y2P5 690 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 TCRBV5S1A1TA0A578 114 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 USP27XA6NNY8 438 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 TNFRSF10BO14763 440 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 PAPSS1O43252 624 aaPredicted RBP11.3□□□□□ -0.6
SS18-213ENST00000579640 TGM5O43548 720 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 RTN3O95197 1032 aaPredicted RBP11.3□□□□□ -0.6
SS18-213ENST00000579640 GLUD1P00367 558 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 LCP1P13796 627 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 IRS1P35568 1242 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 ALDH1A3P47895 512 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 SLC6A3Q01959 620 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 ADIGQ0VDE8 80 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 MAMLD1Q13495 774 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 DDR2Q16832 855 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 C2CD6Q53TS8 623 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 EFHC1Q5JVL4 640 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 CCDC149Q6ZUS6 474 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 FAM183BPQ6ZVS7 135 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 NUP93Q8N1F7 819 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 SLC35G2Q8TBE7 412 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 IRGQQ8WZA9 623 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 SELENOOQ9BVL4 669 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 NUP85Q9BW27 656 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 CRISPLD1Q9H336 500 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 FBXO44Q9H4M3 255 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 ASNSD1Q9NWL6 643 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 TJP2Q9UDY2 1190 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 DPP7Q9UHL4 492 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 FBXW11Q9UKB1 542 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 GUCA1BQ9UMX6 200 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 TFR2Q9UP52 801 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 USP3Q9Y6I4 520 aa11.3□□□□□ -0.6
SS18-213ENST00000579640 A0A0U1RQJ8 604 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 FAM170AA1A519 330 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 SIGLEC16A6NMB1 481 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 PRRG1O14668 218 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 ATMINO43313 823 aaPredicted RBP11.29□□□□□ -0.6
SS18-213ENST00000579640 GABBR2O75899 941 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 SEC24AO95486 1093 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 ZBED1O96006 694 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 GLI1P08151 1106 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 KRT3P12035 628 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 NOP2P46087 812 aaKnown RBP11.29□□□□□ -0.6
SS18-213ENST00000579640 CDR1P51861 262 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 SLC5A3P53794 718 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 MRPS5P82675 430 aaKnown RBP11.29□□□□□ -0.6
SS18-213ENST00000579640 FAM102AQ5T9C2 384 aaPredicted RBP11.29□□□□□ -0.6
SS18-213ENST00000579640 PM20D1Q6GTS8 502 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 ELMSAN1Q6PJG2 1045 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 OLFML1Q6UWY5 402 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 DENND5BQ6ZUT9 1274 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 SLC26A9Q7LBE3 791 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 ARCQ7LC44 396 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 SCUBE3Q8IX30 993 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 TTC9BQ8N6N2 239 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 FEZF2Q8TBJ5 459 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 ZNF564Q8TBZ8 553 aaPredicted RBP11.29□□□□□ -0.6
SS18-213ENST00000579640 GDPD5Q8WTR4 605 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 HDAC7Q8WUI4 952 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 ATRIPQ8WXE1 791 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 PPP2R3CQ969Q6 453 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 TRIM62Q9BVG3 475 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 IL37Q9NZH6 218 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 YIPF1Q9Y548 306 aa11.29□□□□□ -0.6
SS18-213ENST00000579640 MACROD2A1Z1Q3 448 aa11.28□□□□□ -0.6
SS18-213ENST00000579640 ESPNB1AK53 854 aa11.28□□□□□ -0.6
SS18-213ENST00000579640 GOLGA8SH3BPF8 625 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms