RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 SLC9A3R1O14745 358 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 OGTO15294 1046 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 RRP8O43159 456 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 TLX3O43711 291 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 ADH1CP00326 375 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 PLS3P13797 630 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 NTSR1P30989 418 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 EIF2DP41214 584 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 ANAPC15P60006 121 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 KCNC4Q03721 635 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 PDIA5Q14554 519 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 KYAT1Q16773 422 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 HLA-BQ31612 363 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 TAF1BQ53T94 588 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 C10orf76Q5T2E6 689 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 KIAA1324Q6UXG2 1013 aaKnown RBP14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 GPR155Q7Z3F1 870 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 MIB1Q86YT6 1006 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 SPATA2LQ8IUW3 424 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 NECAB1Q8N987 351 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 BAHD1Q8TBE0 780 aaPredicted RBP14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 SPIRE2Q8WWL2 714 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 RNF38Q9H0F5 515 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 DPP3Q9NY33 737 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 CFAP97Q9P2B7 532 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 AK5Q9Y6K8 562 aa14.14□□□□□ -0.15
CDK5RAP3-213ENST00000579605 KPNA7A9QM74 516 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 TRIM24O15164 1050 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 DKK1O94907 266 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 CER1O95813 267 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 NEFLP07196 543 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 ADRB2P07550 413 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 PDE6CP51160 858 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 CLDN6P56747 220 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 GUCY1B3Q02153 619 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 MYO1EQ12965 1108 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 TRIM29Q14134 588 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 ZRSR1Q15695 479 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 SMAD1Q15797 465 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 LY6G5CQ5SRR4 150 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 SDE2Q6IQ49 451 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 CD302Q8IX05 232 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 IPO4Q8TEX9 1081 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 TSPAN18Q96SJ8 248 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 ACOX2Q99424 681 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 MSTO1Q9BUK6 570 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 DDX43Q9NXZ2 648 aaKnown RBP14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 TRPM5Q9NZQ8 1165 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 HCN2Q9UL51 889 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 RAD54BQ9Y620 910 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 PTPRBP23467 1997 aa14.13□□□□□ -0.15
CDK5RAP3-213ENST00000579605 HNRNPDLO14979 420 aaKnown RBP14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 FLRT2O43155 660 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 FAM189A1O60320 539 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 ACOT2P49753 483 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 BNC1Q01954 994 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 GAD2Q05329 585 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 SV2CQ496J9 727 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 BTBD8Q5XKL5 378 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 EGFLAMQ63HQ2 1017 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 PCSK4Q6UW60 755 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 KCNK18Q7Z418 384 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 CHPFQ8IZ52 775 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 PHTF2Q8N3S3 785 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 PDCL2Q8N4E4 241 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 GPR174Q9BXC1 333 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 ABCB6Q9NP58 842 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 DEC1Q9P2X7 70 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 DNMT3LQ9UJW3 386 aa14.12□□□□□ -0.15
CDK5RAP3-213ENST00000579605 NPHP3-ACAD11A0A0J9YXS1 232 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 TEX51A0A1B0GUA7 166 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 CAPN8A6NHC0 703 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 PP2D1A8MPX8 630 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 TNFSF14O43557 240 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 HCRTO43612 131 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 TULP3O75386 442 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 ZNF883P0CG24 379 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 NCAM1P13591 858 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 JUPP14923 745 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 CD6P30203 668 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 CDC25AP30304 524 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 USP46P62068 366 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 CXADRP78310 365 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 SUZ12Q15022 739 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 ME3Q16798 604 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 ANO4Q32M45 955 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 INTS6LQ5JSJ4 861 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 IL27RAQ6UWB1 636 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 NUDT18Q6ZVK8 323 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 FAM181AQ8N9Y4 354 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 LEO1Q8WVC0 666 aaPredicted RBP14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 GTF3C6Q969F1 213 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 NXPE2Q96DL1 559 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 TOE1Q96GM8 510 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 ACBD6Q9BR61 282 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 KCNG1Q9UIX4 513 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 CPSF3Q9UKF6 684 aaKnown RBP14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 HECTD1Q9ULT8 2610 aa14.11□□□□□ -0.15
CDK5RAP3-213ENST00000579605 DERAQ9Y315 318 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms