RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 TGS1Q96RS0 853 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 TSPAN18Q96SJ8 248 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 YME1L1Q96TA2 773 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 PKMYT1Q99640 499 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 CGRRF1Q99675 332 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 BPIFA3Q9BQP9 254 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 RTP3Q9BQQ7 232 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 TCHPQ9BT92 498 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 HERC2P3Q9BVR0 1158 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 GTPBP4Q9BZE4 634 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 TRIM6Q9C030 488 aaPredicted RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 MTMR12Q9C0I1 747 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 SDCBP2Q9H190 292 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 DNAJC25Q9H1X3 360 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 ZNF576Q9H609 170 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 VRTNQ9H8Y1 702 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 RPF1Q9H9Y2 349 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 KIAA1586Q9HCI6 787 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 PARP2Q9UGN5 583 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 HOOK1Q9UJC3 728 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 LRFN2Q9ULH4 789 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 UBQLN1Q9UMX0 589 aaKnown RBP4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 LZTS1Q9Y250 596 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 INPP5FQ9Y2H2 1132 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 COQ4Q9Y3A0 265 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 ACTL7BQ9Y614 415 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 IRAK3Q9Y616 596 aa4.09□□□□□ -1.75
SMARCE1-215ENST00000578995 TICRRQ7Z2Z1 1910 aa4.09□□□□□ -1.76
SMARCE1-215ENST00000578995 MYOFQ9NZM1 2061 aa4.09□□□□□ -1.76
SMARCE1-215ENST00000578995 SYCE3A1L190 88 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 ZNF233A6NK53 670 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 I3L4J1 428 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 PODXLO00592 558 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 IKBKBO14920 756 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 ADAM12O43184 909 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 CALUO43852 315 aaPredicted RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 EIF4EBP3O60516 100 aaPredicted RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 EXOC3O60645 756 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 ZC3H11AO75152 810 aaKnown RBP eCLIP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 GLP2RO95838 553 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 DLGAP3O95886 979 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 ASS1P00966 412 aaKnown RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 ITGB3P05106 788 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 CYP11A1P05108 521 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 TRIM49P0CI25 452 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 TRIM49CP0CI26 452 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 BMP7P18075 431 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 RPL9P32969 192 aaKnown RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 CTNNB1P35222 781 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 PSMC2P35998 433 aaKnown RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 ASPAP45381 313 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 BRCC3P46736 316 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 LINC00310P59036 64 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 LILRA4P59901 499 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 FKBP3Q00688 224 aaKnown RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 UBE3AQ05086 875 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 NCBP1Q09161 790 aaKnown RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 ADAM9Q13443 819 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 HSP90AA2PQ14568 343 aaPredicted RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 TMEM132DQ14C87 1099 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 PTPN14Q15678 1187 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 STX1AQ16623 288 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 CCDC142Q17RM4 750 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 ZXDCQ2QGD7 858 aaPredicted RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 ANO6Q4KMQ2 910 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 TIGD5Q53EQ6 642 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 FYB2Q5VWT5 728 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 HGSNATQ68CP4 663 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 KLHL10Q6JEL2 608 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 FUT10Q6P4F1 479 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 TRAPPC11Q7Z392 1133 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 APBB1IPQ7Z5R6 666 aaPredicted RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 FRMD5Q7Z6J6 570 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 FILIP1Q7Z7B0 1213 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 DDX53Q86TM3 631 aaKnown RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 OSTM1Q86WC4 334 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 GAS2L3Q86XJ1 694 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 GPR65Q8IYL9 337 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 FAM186BQ8IYM0 893 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 HACE1Q8IYU2 909 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 LRRC52Q8N7C0 313 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 OLIG1Q8TAK6 271 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 LNX1Q8TBB1 728 aaPredicted RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 ENOX1Q8TC92 643 aaKnown RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 URGCPQ8TCY9 931 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 TAS1R2Q8TE23 839 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 HASPINQ8TF76 798 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 KBTBD7Q8WVZ9 684 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 ELMO3Q96BJ8 720 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 KIRREL1Q96J84 757 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 B3GALT6Q96L58 329 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 UROC1Q96N76 676 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 ZNF558Q96NG5 402 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 CDX2Q99626 313 aaPredicted RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 PRDM12Q9H4Q4 367 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 NSUN3Q9H649 340 aaKnown RBP4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 ACSS3Q9H6R3 686 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 CERS4Q9HA82 394 aa4.08□□□□□ -1.76
SMARCE1-215ENST00000578995 SLC28A3Q9HAS3 691 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms