RNA–Protein interactions for RNA: ENST00000578571.5

PTPRM-207, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 1,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-207ENST00000578571 NAPBQ9H115 298 aa5.9□□□□□ -1.46
PTPRM-207ENST00000578571 DHX36Q9H2U1 1008 aaKnown RBP5.9□□□□□ -1.46
PTPRM-207ENST00000578571 ZNF703Q9H7S9 590 aaPredicted RBP5.9□□□□□ -1.46
PTPRM-207ENST00000578571 ATP8A2Q9NTI2 1148 aa5.9□□□□□ -1.46
PTPRM-207ENST00000578571 AATFQ9NY61 560 aaKnown RBP eCLIP5.9□□□□□ -1.46
PTPRM-207ENST00000578571 ARPP21Q9UBL0 812 aaPredicted RBP5.9□□□□□ -1.46
PTPRM-207ENST00000578571 CLCA2Q9UQC9 943 aa5.9□□□□□ -1.46
PTPRM-207ENST00000578571 RUVBL1Q9Y265 456 aaKnown RBP5.9□□□□□ -1.46
PTPRM-207ENST00000578571 CFAP20Q9Y6A4 193 aaKnown RBP5.9□□□□□ -1.46
PTPRM-207ENST00000578571 GAKO14976 1311 aa5.9□□□□□ -1.47
PTPRM-207ENST00000578571 GPR75-ASB3A0A0A6YYF3 556 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 LEFTY2O00292 366 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 RFPL1O75677 317 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 MBD4O95243 580 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 C1SP09871 688 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 ZKSCAN1P17029 563 aaPredicted RBP5.89□□□□□ -1.47
PTPRM-207ENST00000578571 VCAM1P19320 739 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 AKAP5P24588 427 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 EPHX2P34913 555 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 NF2P35240 595 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 ZNF280AP59817 542 aaPredicted RBP5.89□□□□□ -1.47
PTPRM-207ENST00000578571 RAP2BP61225 183 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 TRDNQ13061 729 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 LRRC41Q15345 812 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 IMMTQ16891 758 aaKnown RBP5.89□□□□□ -1.47
PTPRM-207ENST00000578571 NRN1LQ496H8 165 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 ATXN7L2Q5T6C5 722 aaPredicted RBP5.89□□□□□ -1.47
PTPRM-207ENST00000578571 FKBP1CQ5VVH2 108 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 METRNLQ641Q3 311 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 PPP4R3AQ6IN85 833 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 EFCAB12Q6NXP0 572 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 RSPH3Q86UC2 560 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 PLXDC1Q8IUK5 500 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 CERS5Q8N5B7 392 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 MIGA1Q8NAN2 632 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 ZFP28Q8NHY6 868 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 DCPSQ96C86 337 aaKnown RBP5.89□□□□□ -1.47
PTPRM-207ENST00000578571 CLPTM1LQ96KA5 538 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 KRTAP9-3Q9BYQ3 159 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 KRTAP4-2Q9BYR5 136 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 PNMA8BQ9ULN7 279 aaPredicted RBP5.89□□□□□ -1.47
PTPRM-207ENST00000578571 G3BP2Q9UN86 482 aaKnown RBP5.89□□□□□ -1.47
PTPRM-207ENST00000578571 SLC4A4Q9Y6R1 1079 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 SCN4AP35499 1836 aa5.89□□□□□ -1.47
PTPRM-207ENST00000578571 MYH2Q9UKX2 1941 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 SCN9AQ15858 1988 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 ENTPD3O75355 529 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 PCP11498 1178 aaKnown RBP5.88□□□□□ -1.47
PTPRM-207ENST00000578571 INSRRP14616 1297 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 APOBEC3AP31941 199 aaPredicted RBP5.88□□□□□ -1.47
PTPRM-207ENST00000578571 TLE1Q04724 770 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 KRT32Q14532 448 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 ZNF529Q6P280 563 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 TPH2Q8IWU9 490 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 DRC7Q8IY82 874 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 CACTINQ8WUQ7 758 aaKnown RBP5.88□□□□□ -1.47
PTPRM-207ENST00000578571 ZNF503Q96F45 646 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 RNF41Q9H4P4 317 aaPredicted RBP5.88□□□□□ -1.47
PTPRM-207ENST00000578571 ARMT1Q9H993 441 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 VEZTQ9HBM0 779 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 FBXO34Q9NWN3 711 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 FAM30AQ9NZY2 134 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 KLHL42Q9P2K6 505 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 MYRFQ9Y2G1 1151 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 ZMYM6O95789 1325 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 COL4A5P29400 1685 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 WDR90Q96KV7 1748 aa5.88□□□□□ -1.47
PTPRM-207ENST00000578571 A0A0D9SFI3 127 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 DRGXA6NNA5 263 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 ZNF213O14771 459 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 MATN3O15232 486 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 SCGB1D2O95969 90 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 MGAT1P26572 445 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 PRELPP51888 382 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 DGCR2P98153 550 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 SLC25A3Q00325 362 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 NHLH2Q02577 135 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 PICALMQ13492 652 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 RAB39AQ14964 217 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 SUPT20HL1Q3ZLR7 823 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 RABL3Q5HYI8 236 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 CDC42EP5Q6NZY7 148 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 TTC7BQ86TV6 843 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 LCORLQ8N3X6 602 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 HPS3Q969F9 1004 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 FAM227BQ96M60 508 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 STRBPQ96SI9 672 aaKnown RBP5.87□□□□□ -1.47
PTPRM-207ENST00000578571 NEU1Q99519 415 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 RIOK1Q9BRS2 568 aaKnown RBP5.87□□□□□ -1.47
PTPRM-207ENST00000578571 MXD3Q9BW11 206 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 IDI2Q9BXS1 227 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 C11orf54Q9H0W9 315 aaPredicted RBP5.87□□□□□ -1.47
PTPRM-207ENST00000578571 TAF1DQ9H5J8 278 aaPredicted RBP5.87□□□□□ -1.47
PTPRM-207ENST00000578571 TDRD3Q9H7E2 651 aaKnown RBP5.87□□□□□ -1.47
PTPRM-207ENST00000578571 MCM9Q9NXL9 1143 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 GGA3Q9NZ52 723 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 CALCOCO1Q9P1Z2 691 aa5.87□□□□□ -1.47
PTPRM-207ENST00000578571 ZNF70Q9UC06 446 aaPredicted RBP5.87□□□□□ -1.47
PTPRM-207ENST00000578571 HERC5Q9UII4 1024 aaKnown RBP5.87□□□□□ -1.47
PTPRM-207ENST00000578571 CHST2Q9Y4C5 530 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms