RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 TMEM63CQ9P1W3 806 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 HMGXB4Q9UGU5 601 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 GMEB2Q9UKD1 530 aa13.58□□□□□ -0.24
CCDC57-211ENST00000578187 MAGED2Q9UNF1 606 aaPredicted RBP13.58□□□□□ -0.24
CCDC57-211ENST00000578187 SMG5Q9UPR3 1016 aaKnown RBP13.58□□□□□ -0.24
CCDC57-211ENST00000578187 FANCMQ8IYD8 2048 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 KIF26AQ9ULI4 1882 aaPredicted RBP13.57□□□□□ -0.24
CCDC57-211ENST00000578187 MYO16Q9Y6X6 1858 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 HELZP42694 1942 aaKnown RBP13.57□□□□□ -0.24
CCDC57-211ENST00000578187 SPECC1L-ADORA2AF8WAN1 911 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 AFPP02771 609 aaKnown RBP13.57□□□□□ -0.24
CCDC57-211ENST00000578187 SDHBP21912 280 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 CXCL12P48061 93 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 GPR15P49685 360 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 NDST1P52848 882 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 CYP27A1Q02318 531 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 FZD5Q13467 585 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 TSSK4Q6SA08 328 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 VSTM1Q6UX27 236 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 IRF2BP1Q8IU81 584 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 GPIHBP1Q8IV16 184 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 CMTM8Q8IZV2 173 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 SPEM1Q8N4L4 309 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 SUMF1Q8NBK3 374 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 TNIP3Q96KP6 325 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 EPC1Q9H2F5 836 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 THAP9Q9H5L6 903 aa13.57□□□□□ -0.24
CCDC57-211ENST00000578187 MAGEC2Q9UBF1 373 aaPredicted RBP13.57□□□□□ -0.24
CCDC57-211ENST00000578187 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC57-211ENST00000578187 LILRB5O75023 590 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 CILPO75339 1184 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 NOL4O94818 638 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 CHRNB1P11230 501 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 CTHP32929 405 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 KCNH2Q12809 1159 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 ITPRIPL2Q3MIP1 535 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 WDR44Q5JSH3 913 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 ZNF687Q8N1G0 1237 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 CRYBG2Q8N1P7 616 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 SYNPOQ8N3V7 929 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 TTC39CQ8N584 583 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 MAB21L3Q8N8X9 362 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 LMO3Q8TAP4 145 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 NELL1Q92832 810 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 TATDN2Q93075 761 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 RSPRY1Q96DX4 576 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 ZFYVE19Q96K21 471 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 CEP295NLQ96MC4 621 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 TWNKQ96RR1 684 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 ARID3AQ99856 593 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 B3GNT5Q9BYG0 378 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 ELOVL4Q9GZR5 314 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 IL21Q9HBE4 155 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 GTSE1Q9NYZ3 720 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 NCANO14594 1321 aa13.56□□□□□ -0.24
CCDC57-211ENST00000578187 SHISA7A6NL88 538 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 TRIM66O15016 1216 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 PRAMEF12O95522 483 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 HMGA1P17096 107 aaKnown RBP13.55□□□□□ -0.24
CCDC57-211ENST00000578187 CD58P19256 250 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 BDNFP23560 247 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 SOX9P48436 509 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 PDE6CP51160 858 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 ORC1Q13415 861 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 STX1AQ16623 288 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 DDR2Q16832 855 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 TPD52L1Q16890 204 aaPredicted RBP13.55□□□□□ -0.24
CCDC57-211ENST00000578187 SDHAF4Q5VUM1 108 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 SASS6Q6UVJ0 657 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 ACOT1Q86TX2 421 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 FAM35AQ86V20 835 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 FAM114A1Q8IWE2 563 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 FUKQ8N0W3 1084 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 UBR7Q8N806 425 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 TTC8Q8TAM2 541 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 WHAMMQ8TF30 809 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 TRMT2BQ96GJ1 504 aaKnown RBP13.55□□□□□ -0.24
CCDC57-211ENST00000578187 SPATA17Q96L03 361 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 SLC46A2Q9BY10 475 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 ZNF518BQ9C0D4 1074 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 TDP1Q9NUW8 608 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 ANO10Q9NW15 660 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 EHD2Q9NZN4 543 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 ATP8B3O60423 1300 aa13.55□□□□□ -0.24
CCDC57-211ENST00000578187 CLDN5O00501 218 aa13.54□□□□□ -0.24
CCDC57-211ENST00000578187 PYGBP11216 843 aa13.54□□□□□ -0.24
CCDC57-211ENST00000578187 TBXAS1P24557 533 aaPredicted RBP13.54□□□□□ -0.24
CCDC57-211ENST00000578187 ANXA13P27216 316 aa13.54□□□□□ -0.24
CCDC57-211ENST00000578187 CNR2P34972 360 aa13.54□□□□□ -0.24
CCDC57-211ENST00000578187 CACNA2D1P54289 1103 aa13.54□□□□□ -0.24
CCDC57-211ENST00000578187 CETN1Q12798 172 aa13.54□□□□□ -0.24
CCDC57-211ENST00000578187 GRSF1Q12849 480 aaKnown RBP eCLIP13.54□□□□□ -0.24
CCDC57-211ENST00000578187 CUL2Q13617 745 aa13.54□□□□□ -0.24
CCDC57-211ENST00000578187 PUM1Q14671 1186 aaKnown RBP eCLIP13.54□□□□□ -0.242e-11■□□□□ 9.7
CCDC57-211ENST00000578187 PON2Q15165 354 aa13.54□□□□□ -0.24
CCDC57-211ENST00000578187 KLHL40Q2TBA0 621 aa13.54□□□□□ -0.24
CCDC57-211ENST00000578187 PAQR9Q6ZVX9 377 aa13.54□□□□□ -0.24
CCDC57-211ENST00000578187 DGLUCYQ7Z3D6 616 aa13.54□□□□□ -0.24
CCDC57-211ENST00000578187 MON1AQ86VX9 555 aa13.54□□□□□ -0.24
CCDC57-211ENST00000578187 SCN4BQ8IWT1 228 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms