RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 ZMIZ2Q8NF64 920 aa19.49■□□□□ 0.71
PRKCA-203ENST00000578063 RNPC3Q96LT9 517 aaKnown RBP19.49■□□□□ 0.71
PRKCA-203ENST00000578063 YME1L1Q96TA2 773 aa19.49■□□□□ 0.71
PRKCA-203ENST00000578063 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.49■□□□□ 0.713e-6■□□□□ 8.7
PRKCA-203ENST00000578063 HTATIP2Q9BUP3 242 aa19.49■□□□□ 0.71
PRKCA-203ENST00000578063 ALPK3Q96L96 1907 aa19.49■□□□□ 0.71
PRKCA-203ENST00000578063 F8VP50 259 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 DPYSL4O14531 572 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 SART1O43290 800 aaKnown RBP19.48■□□□□ 0.71
PRKCA-203ENST00000578063 RNASE9P60153 205 aaKnown RBP19.48■□□□□ 0.71
PRKCA-203ENST00000578063 RAB41Q5JT25 222 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 EFHC1Q5JVL4 640 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 RSRC2Q7L4I2 434 aaKnown RBP19.48■□□□□ 0.71
PRKCA-203ENST00000578063 TMCO2Q7Z6W1 182 aaPredicted RBP19.48■□□□□ 0.71
PRKCA-203ENST00000578063 UBXN4Q92575 508 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 NAP1L3Q99457 506 aaPredicted RBP19.48■□□□□ 0.71
PRKCA-203ENST00000578063 CNPY3Q9BT09 278 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 ASNSD1Q9NWL6 643 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 PDGFRAP16234 1089 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 FLT3P36888 993 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 SSR1P43307 286 aaKnown RBP19.48■□□□□ 0.71
PRKCA-203ENST00000578063 TKTL1P51854 596 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 CACNA2D1P54289 1103 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 TAS2R40P59535 323 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 MRPS5P82675 430 aaKnown RBP19.48■□□□□ 0.71
PRKCA-203ENST00000578063 ADCY1Q08828 1119 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 SMARCB1Q12824 385 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 USP41Q3LFD5 358 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 RTP2Q5QGT7 225 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 RNF168Q8IYW5 571 aaPredicted RBP19.48■□□□□ 0.71
PRKCA-203ENST00000578063 SPATA4Q8NEY3 305 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 RXFP2Q8WXD0 754 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 KCNK16Q96T55 309 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 RHOBTB2Q9BYZ6 727 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 CNGB3Q9NQW8 809 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 TMEM30AQ9NV96 361 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 EHD2Q9NZN4 543 aa19.48■□□□□ 0.71
PRKCA-203ENST00000578063 MRPL42Q9Y6G3 142 aaKnown RBP19.48■□□□□ 0.71
PRKCA-203ENST00000578063 HHLA1C9JL84 531 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 HSF2BPO75031 334 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 GRAP2O75791 330 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 RNF8O76064 485 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 GLI1P08151 1106 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 OR4Q2P0C623 313 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 SDC4P31431 198 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 DAB2IPQ5VWQ8 1189 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 POLNQ7Z5Q5 900 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 KATNAL2Q8IYT4 538 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 SLC39A11Q8N1S5 342 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 CLEC4CQ8WTT0 213 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 KHSRPQ92945 711 aaKnown RBP eCLIP19.47■□□□□ 0.713e-8■■■■□ 21.5
PRKCA-203ENST00000578063 TMEM169Q96HH4 297 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 B3GALT6Q96L58 329 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 NCAPGQ9BPX3 1015 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 SMARCAL1Q9NZC9 954 aa19.47■□□□□ 0.71
PRKCA-203ENST00000578063 TBC1D4O60343 1298 aa19.46■□□□□ 0.71
PRKCA-203ENST00000578063 LRCH4O75427 683 aa19.46■□□□□ 0.71
PRKCA-203ENST00000578063 GJB5O95377 273 aa19.46■□□□□ 0.71
PRKCA-203ENST00000578063 CDR1P51861 262 aa19.46■□□□□ 0.71
PRKCA-203ENST00000578063 ZNF211Q13398 564 aaPredicted RBP19.46■□□□□ 0.71
PRKCA-203ENST00000578063 TAF5Q15542 800 aa19.46■□□□□ 0.71
PRKCA-203ENST00000578063 HADHQ16836 314 aaKnown RBP19.46■□□□□ 0.71
PRKCA-203ENST00000578063 TMEM240Q5SV17 173 aa19.46■□□□□ 0.71
PRKCA-203ENST00000578063 TEX35Q5T0J7 233 aa19.46■□□□□ 0.71
PRKCA-203ENST00000578063 VSTM1Q6UX27 236 aa19.46■□□□□ 0.71
PRKCA-203ENST00000578063 COLGALT1Q8NBJ5 622 aa19.46■□□□□ 0.71
PRKCA-203ENST00000578063 ABI2Q9NYB9 513 aaPredicted RBP19.46■□□□□ 0.71
PRKCA-203ENST00000578063 PCDHB5Q9Y5E4 795 aa19.46■□□□□ 0.71
PRKCA-203ENST00000578063 VWA8A3KMH1 1905 aa19.46■□□□□ 0.71
PRKCA-203ENST00000578063 CPB1P15086 417 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 PCK1P35558 622 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 PPM1AP35813 382 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 PTPN9P43378 593 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 HTRA4P83105 476 aaPredicted RBP19.45■□□□□ 0.7
PRKCA-203ENST00000578063 TRNP1Q6NT89 227 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 SCML4Q8N228 414 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 PIK3R5Q8WYR1 880 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 ULBP1Q9BZM6 244 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 AAASQ9NRG9 546 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 DDX56Q9NY93 547 aaKnown RBP19.45■□□□□ 0.7
PRKCA-203ENST00000578063 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.45■□□□□ 0.7
PRKCA-203ENST00000578063 V9GYY5 206 aaPredicted RBP19.45■□□□□ 0.7
PRKCA-203ENST00000578063 DAB1O75553 588 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 FGGP02679 453 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 SOD2P04179 222 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 KRT7P08729 469 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 PYGMP11217 842 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 GRIK1P39086 918 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 MAGEA11P43364 429 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 DAOAP59103 153 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 GPR17Q13304 367 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 ERCC6LQ2NKX8 1250 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 CCDC14Q49A88 953 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 TAS1R1Q7RTX1 841 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 GPRIN1Q7Z2K8 1008 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 EXD1Q8NHP7 514 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 C2orf15Q8WU43 125 aaKnown RBP19.45■□□□□ 0.7
PRKCA-203ENST00000578063 FAM149B1Q96BN6 582 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 HERC2P3Q9BVR0 1158 aa19.45■□□□□ 0.7
PRKCA-203ENST00000578063 CHST7Q9NS84 486 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms