RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 HEATR9A2RTY3 570 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 OTUD4Q01804 1114 aaKnown RBP11.11□□□□□ -0.63
SEC22B-201ENST00000578049 NAIF1Q69YI7 327 aaPredicted RBP11.11□□□□□ -0.63
SEC22B-201ENST00000578049 ERO1BQ86YB8 467 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 RHBDL2Q9NX52 303 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 CYP39A1Q9NYL5 469 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 PCDHA3Q9Y5H8 950 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 ABCA9Q8IUA7 1624 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 PNMA8CA0A1B0GUJ8 204 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 LIN7AO14910 233 aaPredicted RBP11.11□□□□□ -0.63
SEC22B-201ENST00000578049 HBP1O60381 514 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 MPOP05164 745 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 FASP25445 335 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 ACAP1Q15027 740 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 Q4G0T1 1027 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 LRRC8DQ7L1W4 858 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 SYTL2Q9HCH5 934 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.11□□□□□ -0.63
SEC22B-201ENST00000578049 MROH7Q68CQ1 1323 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 FAM95CA0A1B0GW59 222 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 MSH4O15457 936 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 ZNF23P17027 643 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 ANXA11P50995 505 aaKnown RBP11.11□□□□□ -0.63
SEC22B-201ENST00000578049 ELF3P78545 371 aaPredicted RBP11.11□□□□□ -0.63
SEC22B-201ENST00000578049 POU4F1Q01851 419 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 ARMCX4Q5H9R4 360 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 SH3RF1Q7Z6J0 888 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 SVOPQ8N4V2 548 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 AFG1LQ8WV93 481 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 OXNAD1Q96HP4 312 aaPredicted RBP11.11□□□□□ -0.63
SEC22B-201ENST00000578049 C17orf80Q9BSJ5 609 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 TCF7L2Q9NQB0 619 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 LATS2Q9NRM7 1088 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 CD274Q9NZQ7 290 aa11.11□□□□□ -0.63
SEC22B-201ENST00000578049 MYO1GB0I1T2 1018 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 SUPT3HB4E1H0 165 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 SNX3O60493 162 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 ABHD2P08910 425 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 NUDT17P0C025 328 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 MMRN1Q13201 1228 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 PKN2Q16513 984 aaKnown RBP11.1□□□□□ -0.63
SEC22B-201ENST00000578049 SPDYAQ5MJ70 313 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 RNF43Q68DV7 783 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 KYAT3Q6YP21 454 aaKnown RBP11.1□□□□□ -0.63
SEC22B-201ENST00000578049 ELMOD1Q8N336 334 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 ZNF333Q96JL9 665 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 PPP1R16BQ96T49 567 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 DCLK3Q9C098 648 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 H2AFY2Q9P0M6 372 aaPredicted RBP11.1□□□□□ -0.63
SEC22B-201ENST00000578049 TRDMT1O14717 391 aaKnown RBP11.1□□□□□ -0.63
SEC22B-201ENST00000578049 LZTS3O60299 673 aaPredicted RBP11.1□□□□□ -0.63
SEC22B-201ENST00000578049 TCN1P20061 433 aaPredicted RBP11.1□□□□□ -0.63
SEC22B-201ENST00000578049 PSMA3P25788 255 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 AKT1P31749 480 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 PPIDQ08752 370 aaKnown RBP11.1□□□□□ -0.63
SEC22B-201ENST00000578049 TBL3Q12788 808 aaKnown RBP11.1□□□□□ -0.63
SEC22B-201ENST00000578049 CLEC16AQ2KHT3 1053 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 COBLL1Q53SF7 1204 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 CCDC103Q8IW40 242 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 FAM151AQ8WW52 585 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 PACSIN1Q9BY11 444 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 MRPS26Q9BYN8 205 aaKnown RBP11.1□□□□□ -0.63
SEC22B-201ENST00000578049 ADAM33Q9BZ11 813 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 TFR2Q9UP52 801 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 PKP3Q9Y446 797 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 ERFP50548 548 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 CDK16Q00536 496 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 TIGD7Q6NT04 549 aaPredicted RBP11.1□□□□□ -0.63
SEC22B-201ENST00000578049 BRINP3Q76B58 766 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 LPCAT2Q7L5N7 544 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 FASTKD5Q7L8L6 764 aaKnown RBP11.1□□□□□ -0.63
SEC22B-201ENST00000578049 ZNF720Q7Z2F6 126 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 TBC1D16Q8TBP0 767 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 VPS50Q96JG6 964 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 CGRRF1Q99675 332 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 BDH2Q9BUT1 245 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 METTL5Q9NRN9 209 aaKnown RBP11.1□□□□□ -0.63
SEC22B-201ENST00000578049 KCNH7Q9NS40 1196 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.1□□□□□ -0.631e-7■■□□□ 13.1
SEC22B-201ENST00000578049 SALL1Q9NSC2 1324 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 RXRGP48443 463 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 ZNF135P52742 658 aaPredicted RBP11.1□□□□□ -0.63
SEC22B-201ENST00000578049 XIAPP98170 497 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 LAMC2Q13753 1193 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 SETD9Q8NE22 299 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 CHST13Q8NET6 341 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 CKAP2Q8WWK9 683 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 PRRG3Q9BZD7 231 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 LRRC4BQ9NT99 713 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 MYRFQ9Y2G1 1151 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 CD163L1Q9NR16 1453 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 FAM196BA6NMK8 535 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 BCL10O95999 233 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 IFNA14P01570 189 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 NAMPTP43490 491 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 ERMARDQ5T6L9 678 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 PDPK2PQ6A1A2 396 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 NT5DC3Q86UY8 548 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 ZNF507Q8TCN5 953 aa11.1□□□□□ -0.63
SEC22B-201ENST00000578049 GPR101Q96P66 508 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms