RNA–Protein interactions for RNA: ENST00000577474.2

TRAPPC8-203, Transcript of trafficking protein particle complex 8, humanhuman

TSL 4

Gene TRAPPC8, Length 862 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-203ENST00000577474 BRINP3Q76B58 766 aa5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 GPRIN1Q7Z2K8 1008 aa5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 SUGP1Q8IWZ8 645 aaKnown RBP5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 USP38Q8NB14 1042 aa5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 PDPRQ8NCN5 879 aa5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 ASB12Q8WXK4 309 aa5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 ZDHHC12Q96GR4 267 aa5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 NAF1Q96HR8 494 aaKnown RBP5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 MAELQ96JY0 434 aaKnown RBP5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 ZNF512Q96ME7 567 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 TWSG1Q9GZX9 223 aa5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 NOD2Q9HC29 1040 aa5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 SMC4Q9NTJ3 1288 aa5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 TBC1D22BQ9NU19 505 aa5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 IRAK4Q9NWZ3 460 aa5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 FEM1BQ9UK73 627 aa5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 C19orf53Q9UNZ5 99 aaPredicted RBP5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 AGAP1Q9UPQ3 857 aa5.33□□□□□ -1.56
TRAPPC8-203ENST00000577474 PNPLA7Q6ZV29 1317 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 A0A087X1B8 175 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 E7ENX8 843 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 H7C4K7 107 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 POLRMTO00411 1230 aaKnown RBP5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 PLSCR1O15162 318 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 FOXS1O43638 330 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 MFAP3LO75121 409 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 CD4P01730 458 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 POLBP06746 335 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 IFIT1P09914 478 aaKnown RBP5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 CAPN3P20807 821 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 CNTFP26441 200 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 MCM7P33993 719 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 CDK7P50613 346 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 TAP2Q03519 686 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 SCAPQ12770 1279 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 GPS1Q13098 491 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 ANKRD1Q15327 319 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 RNF151Q2KHN1 245 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 USP39Q53GS9 565 aaKnown RBP5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 HS1BP3Q53T59 392 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 MAP3K21Q5TCX8 1036 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 CACHD1Q5VU97 1274 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 NAA35Q5VZE5 725 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 RAP1GAP2Q684P5 730 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 NFRKBQ6P4R8 1299 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 HERC6Q8IVU3 1022 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 TMEM57Q8N5G2 664 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 SIMC1Q8NDZ2 872 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 ABHD5Q8WTS1 349 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 AFG1LQ8WV93 481 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 CPT1BQ92523 772 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 GRAMD1AQ96CP6 724 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 SLC46A1Q96NT5 459 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 MED15Q96RN5 788 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 PNKPQ96T60 521 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 NELL2Q99435 816 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 MPHOSPH9Q99550 1183 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 NUDT22Q9BRQ3 303 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 SLC46A2Q9BY10 475 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 SLC25A32Q9H2D1 315 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 C12orf65Q9H3J6 166 aaKnown RBP5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 TAF1DQ9H5J8 278 aaPredicted RBP5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 SEC61A2Q9H9S3 476 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 TMLHEQ9NVH6 421 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 NDUFAF4Q9P032 175 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 POGKQ9P215 609 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 OAZ3Q9UMX2 235 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 HPSEQ9Y251 543 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 ATP11BQ9Y2G3 1177 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 RAD54BQ9Y620 910 aa5.32□□□□□ -1.56
TRAPPC8-203ENST00000577474 CCDC195A0A1B0GUA6 201 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 E9PLN8 166 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 K7ENM7 598 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 TSPAN3O60637 253 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 RASAL1O95294 804 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 ITGB1P05556 798 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 PRKCBP05771 671 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 HLA-DOAP06340 250 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 SRGAP2BP0DMP2 458 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 PECAM1P16284 738 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 GCSHP23434 173 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 ZEB1P37275 1124 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 PXNP49023 591 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 PTTG1IPP53801 180 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 BCAT1P54687 386 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 INHBCP55103 352 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 LSM12Q3MHD2 195 aaKnown RBP5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 TRIM60Q495X7 471 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 ANKS6Q68DC2 871 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 SFRP4Q6FHJ7 346 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 TCTN3Q6NUS6 607 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 TAPT1Q6NXT6 567 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 CFAP161Q6P656 301 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 SPARTQ8N0X7 666 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 CFAP52Q8N1V2 620 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 EXTL1Q92935 676 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 GNRHR2Q96P88 292 aa5.31□□□□□ -1.56
TRAPPC8-203ENST00000577474 TRAPPC9Q96Q05 1148 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms