RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 C5orf67F2Z3F1 127 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 I3L4J1 428 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 TRIM66O15016 1216 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 HSF2BPO75031 334 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 ATP2C2O75185 946 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 AP1G2O75843 785 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 URI1O94763 535 aaPredicted RBP13.09□□□□□ -0.31
TSEN54-204ENST00000577197 MYOGP15173 224 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 DNAJB2P25686 324 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 ADORA2BP29275 332 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 PCK1P35558 622 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 PBX2P40425 430 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 PTPN9P43378 593 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 ZNF143P52747 638 aaPredicted RBP13.09□□□□□ -0.31
TSEN54-204ENST00000577197 ERVK-21P61565 698 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 DSG1Q02413 1049 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 CTXN3Q4LDR2 81 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 PIGZQ86VD9 579 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 UBA3Q8TBC4 463 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 HASPINQ8TF76 798 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 C8orf48Q96LL4 319 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 OSBPL9Q96SU4 736 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 NAP1L3Q99457 506 aaPredicted RBP13.09□□□□□ -0.31
TSEN54-204ENST00000577197 RRN3Q9NYV6 651 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 LZTS1Q9Y250 596 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 PCDHA3Q9Y5H8 950 aa13.09□□□□□ -0.31
TSEN54-204ENST00000577197 TIMM13Q9Y5L4 95 aaPredicted RBP13.09□□□□□ -0.31
TSEN54-204ENST00000577197 TMEM265A0A087WTH1 108 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 PAPSS1O43252 624 aaPredicted RBP13.08□□□□□ -0.32
TSEN54-204ENST00000577197 ATMINO43313 823 aaPredicted RBP13.08□□□□□ -0.32
TSEN54-204ENST00000577197 ACAT1P24752 427 aaKnown RBP13.08□□□□□ -0.32
TSEN54-204ENST00000577197 CTNNB1P35222 781 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 GTF2F1P35269 517 aaKnown RBP eCLIP13.08□□□□□ -0.32
TSEN54-204ENST00000577197 KRT17Q04695 432 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 PPP2R2DQ66LE6 453 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 TPGS2Q68CL5 300 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 PM20D1Q6GTS8 502 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 VSIG1Q86XK7 387 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 DNAAF5Q86Y56 855 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 SPATA2LQ8IUW3 424 aaPredicted RBP13.08□□□□□ -0.32
TSEN54-204ENST00000577197 RASGEF1CQ8N431 466 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 ACTRT1Q8TDG2 376 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 RABGGTAQ92696 567 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 TIFAQ96CG3 184 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 SMOQ99835 787 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 CNPY3Q9BT09 278 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 MED10Q9BTT4 135 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 C11orf84Q9BUA3 381 aaPredicted RBP13.08□□□□□ -0.32
TSEN54-204ENST00000577197 NKX2-4Q9H2Z4 354 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 LRRC4Q9HBW1 653 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 ST7Q9NRC1 585 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 FNIP2Q9P278 1114 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 PCDHB5Q9Y5E4 795 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 USP3Q9Y6I4 520 aa13.08□□□□□ -0.32
TSEN54-204ENST00000577197 C2CD4BA6NLJ0 364 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 NT5C1B-RDH14C9J2C7 533 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 HHLA1C9JL84 531 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 F8W810 466 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 ENC1O14682 589 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 HCRTO43612 131 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 SPOPO43791 374 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 FGF18O76093 207 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 SLU7O95391 586 aaKnown RBP13.07□□□□□ -0.32
TSEN54-204ENST00000577197 FTCDO95954 541 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 COMTP21964 271 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 PBX3P40426 434 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 PEX5P50542 639 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 MRPS5P82675 430 aaKnown RBP13.07□□□□□ -0.32
TSEN54-204ENST00000577197 UBE3AQ05086 875 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 MESDQ14696 234 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 PPP2R5EQ16537 467 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 FAM102AQ5T9C2 384 aaPredicted RBP13.07□□□□□ -0.32
TSEN54-204ENST00000577197 CYP4A22Q5TCH4 519 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 FAM183BPQ6ZVS7 135 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 LRRTM3Q86VH5 581 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 TMEM173Q86WV6 379 aaPredicted RBP13.07□□□□□ -0.32
TSEN54-204ENST00000577197 RHOT1Q8IXI2 618 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 SIX6OS1Q8N1H7 587 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 ZMIZ2Q8NF64 920 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 SPATA17Q96L03 361 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 MCEEQ96PE7 176 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 TBCBQ99426 244 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 C17orf80Q9BSJ5 609 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 IL37Q9NZH6 218 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 EHD2Q9NZN4 543 aa13.07□□□□□ -0.32
TSEN54-204ENST00000577197 KIAA1671Q9BY89 1806 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 FAM92AA1XBS5 289 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 ZNF487B1APH4 448 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 DDX3YO15523 660 aaKnown RBP13.06□□□□□ -0.32
TSEN54-204ENST00000577197 DAB1O75553 588 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 ARHGEF15O94989 841 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 KRT7P08729 469 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 GPD1P21695 349 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 SSTR3P32745 418 aaPredicted RBP13.06□□□□□ -0.32
TSEN54-204ENST00000577197 PTPN7P35236 360 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 RFC1P35251 1148 aaPredicted RBP13.06□□□□□ -0.32
TSEN54-204ENST00000577197 PAFAH1B1P43034 410 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 GLUD2P49448 558 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 AIF1P55008 147 aa13.06□□□□□ -0.32
TSEN54-204ENST00000577197 RWDD2BP57060 319 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms