RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 TPM1P09493 284 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 MYL4P12829 197 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 GABRR2P28476 465 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 GPD2P43304 727 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 KCNQ1P51787 676 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 ZNF75DP51815 510 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 KIF11P52732 1056 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 NTHL1P78549 312 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 MTMR3Q13615 1198 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 SFMBT2Q5VUG0 894 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 GAREM2Q75VX8 874 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 OTOP3Q7RTS5 596 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 NOP9Q86U38 636 aaKnown RBP16.58■□□□□ 0.24
CCNE1-204ENST00000574121 SCML4Q8N228 414 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 UBA3Q8TBC4 463 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 SECISBP2LQ93073 1101 aaKnown RBP16.58■□□□□ 0.24
CCNE1-204ENST00000574121 NOX5Q96PH1 765 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 CYLDQ9NQC7 956 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 GDE1Q9NZC3 331 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 NOCTQ9UK39 431 aaKnown RBP16.58■□□□□ 0.24
CCNE1-204ENST00000574121 NR2E1Q9Y466 385 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 USP3Q9Y6I4 520 aa16.58■□□□□ 0.24
CCNE1-204ENST00000574121 F11P03951 625 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 CDH5P33151 784 aaPredicted RBP16.57■□□□□ 0.24
CCNE1-204ENST00000574121 CCR2P41597 374 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 PRKCIP41743 596 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 ACADSBP45954 432 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 RPL34P49207 117 aaKnown RBP16.57■□□□□ 0.24
CCNE1-204ENST00000574121 USP46P62068 366 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 CDR2Q01850 454 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 SLC5A9Q2M3M2 681 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 ARHGAP15Q53QZ3 475 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 DENND1BQ6P3S1 775 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 TRIM72Q6ZMU5 477 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 CCDC186Q7Z3E2 898 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 IRF2BP2Q7Z5L9 587 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.57■□□□□ 0.24
CCNE1-204ENST00000574121 SHKBP1Q8TBC3 707 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 ACSF2Q96CM8 615 aaPredicted RBP16.57■□□□□ 0.24
CCNE1-204ENST00000574121 PDCL3Q9H2J4 239 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 LRRC4Q9HBW1 653 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 CDH7Q9ULB5 785 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 SCML2Q9UQR0 700 aa16.57■□□□□ 0.24
CCNE1-204ENST00000574121 A0A1W2PRU2 124 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 BMP1P13497 986 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 IL9P15248 144 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 PFKLP17858 780 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 DDX6P26196 483 aaKnown RBP eCLIP16.56■□□□□ 0.24
CCNE1-204ENST00000574121 CASP14P31944 242 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 SNX16P57768 344 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 ARID5AQ03989 594 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 TAF10Q12962 218 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 ASIC2Q16515 512 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 PMF1Q6P1K2 205 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 GET4Q7L5D6 327 aaPredicted RBP16.56■□□□□ 0.24
CCNE1-204ENST00000574121 GPRIN1Q7Z2K8 1008 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 TMEM150AQ86TG1 271 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 ADHFE1Q8IWW8 467 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 PLCD3Q8N3E9 789 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 TMEM35BQ8NCS4 154 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 STKLD1Q8NE28 680 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 SCAMP5Q8TAC9 235 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 MRPS31Q92665 395 aaKnown RBP16.56■□□□□ 0.24
CCNE1-204ENST00000574121 FGF13Q92913 245 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 FBXO32Q969P5 355 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 TCEAL4Q96EI5 215 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 SLC4A5Q9BY07 1137 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 ATXN3LQ9H3M9 355 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 CNGB3Q9NQW8 809 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 TRPM5Q9NZQ8 1165 aa16.56■□□□□ 0.24
CCNE1-204ENST00000574121 BZW2Q9Y6E2 419 aaKnown RBP16.56■□□□□ 0.24
CCNE1-204ENST00000574121 TULP2O00295 520 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 SART1O43290 800 aaKnown RBP16.55■□□□□ 0.24
CCNE1-204ENST00000574121 MOSPD3O75425 235 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 FBXO21O94952 628 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 HNRNPH3P31942 346 aaKnown RBP16.55■□□□□ 0.24
CCNE1-204ENST00000574121 PSEN1P49768 467 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 TKTL1P51854 596 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 PDCLQ13371 301 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 ARID5BQ14865 1188 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 SNX30Q5VWJ9 437 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 PM20D1Q6GTS8 502 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 TMEM110Q86TL2 294 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 MON1AQ86VX9 555 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 CNGA4Q8IV77 575 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 NPAS3Q8IXF0 933 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 SIX6OS1Q8N1H7 587 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 ARHGAP18Q8N392 663 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 TDRD5Q8NAT2 981 aaKnown RBP16.55■□□□□ 0.24
CCNE1-204ENST00000574121 ITFG1Q8TB96 612 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 CPLX3Q8WVH0 158 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 TASP1Q9H6P5 420 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 TLR8Q9NR97 1041 aaKnown RBP16.55■□□□□ 0.24
CCNE1-204ENST00000574121 EPS15L1Q9UBC2 864 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 C2orf16Q68DN1 1984 aa16.55■□□□□ 0.24
CCNE1-204ENST00000574121 REV3LO60673 3130 aa16.54■□□□□ 0.24
CCNE1-204ENST00000574121 ZNF840PA6NDX5 716 aa16.54■□□□□ 0.24
CCNE1-204ENST00000574121 TADA3O75528 432 aa16.54■□□□□ 0.24
CCNE1-204ENST00000574121 ZBED1O96006 694 aa16.54■□□□□ 0.24
CCNE1-204ENST00000574121 CYP1A1P04798 512 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms