RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 CALCOCO1Q9P1Z2 691 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 LARSQ9P2J5 1176 aaKnown RBP10.88□□□□□ -0.67
CHMP6-203ENST00000572525 STARD13Q9Y3M8 1113 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 RAI2Q9Y5P3 530 aa10.88□□□□□ -0.67
CHMP6-203ENST00000572525 UBR5O95071 2799 aaPredicted RBP10.87□□□□□ -0.67
CHMP6-203ENST00000572525 C2orf78A6NCI8 922 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 KPNA7A9QM74 516 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 HNRNPDLO14979 420 aaKnown RBP10.87□□□□□ -0.67
CHMP6-203ENST00000572525 FLRT2O43155 660 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 CER1O95813 267 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 GABRG2P18507 467 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 MATR3P43243 847 aaKnown RBP eCLIP10.87□□□□□ -0.67
CHMP6-203ENST00000572525 LIG4P49917 911 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 GRIK2Q13002 908 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 ANKRD1Q15327 319 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 INTS6LQ5JSJ4 861 aaKnown RBP10.87□□□□□ -0.67
CHMP6-203ENST00000572525 WDR45BQ5MNZ6 344 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 IL27RAQ6UWB1 636 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 ZNF605Q86T29 641 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 DDX42Q86XP3 938 aaKnown RBP eCLIP10.87□□□□□ -0.67
CHMP6-203ENST00000572525 TMEM86AQ8N2M4 240 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 PGBD3Q8N328 593 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 OR2I1PQ8NGU4 316 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 BICD1Q96G01 975 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 SPATA17Q96L03 361 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 PRORYQ9H606 182 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 CD248Q9HCU0 757 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 TMLHEQ9NVH6 421 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 EHD2Q9NZN4 543 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 TBC1D14Q9P2M4 693 aa10.87□□□□□ -0.67
CHMP6-203ENST00000572525 CIZ1Q9ULV3 898 aaPredicted RBP10.87□□□□□ -0.67
CHMP6-203ENST00000572525 A0A1B0GTW7 788 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 ANTXRLA6NF34 631 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 TRABD2BA6NFA1 517 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 E9PMD0 336 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 LEFTY2O00292 366 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 LAD1O00515 517 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 ZBTB24O43167 697 aaPredicted RBP10.86□□□□□ -0.67
CHMP6-203ENST00000572525 PTMSP20962 102 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 NTSR1P30989 418 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 GPR15P49685 360 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 ZXDBP98169 803 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 MYL7Q01449 175 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 CYP4F3Q08477 520 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 MESP2Q0VG99 397 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 SMAD1Q15797 465 aaKnown RBP10.86□□□□□ -0.67
CHMP6-203ENST00000572525 DDR2Q16832 855 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 ZC2HC1CQ53FD0 456 aaPredicted RBP10.86□□□□□ -0.67
CHMP6-203ENST00000572525 HYIQ5T013 277 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 KRT79Q5XKE5 535 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 VSTM1Q6UX27 236 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 FILIP1Q7Z7B0 1213 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 METTL3Q86U44 580 aaKnown RBP10.86□□□□□ -0.67
CHMP6-203ENST00000572525 ETFBKMTQ8IXQ9 262 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 ZNF513Q8N8E2 541 aaPredicted RBP10.86□□□□□ -0.67
CHMP6-203ENST00000572525 C4orf32Q8N8J7 132 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 TRIML1Q8N9V2 468 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 LRRC15Q8TF66 581 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 GTF3C6Q969F1 213 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 MSTO1Q9BUK6 570 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 TTLL2Q9BWV7 592 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 FOXP1Q9H334 677 aaPredicted RBP10.86□□□□□ -0.67
CHMP6-203ENST00000572525 DPP3Q9NY33 737 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 COL12A1Q99715 3063 aa10.86□□□□□ -0.67
CHMP6-203ENST00000572525 NUMA1Q14980 2115 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 TEX51A0A1B0GUA7 166 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 SFI1A8K8P3 1242 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 J3QKU1 62 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 CAPN9O14815 690 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 HOXC11O43248 304 aaPredicted RBP10.85□□□□□ -0.67
CHMP6-203ENST00000572525 PRB1P04280 392 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 ADH5P11766 374 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 HOXB2P14652 356 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 CYP2F1P24903 491 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 PCSK1P29120 753 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 PRPHP41219 470 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 ATP2C1P98194 919 aaPredicted RBP10.85□□□□□ -0.67
CHMP6-203ENST00000572525 GAD2Q05329 585 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 C8orf34Q49A92 452 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 EMC10Q5UCC4 262 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 RHBDF2Q6PJF5 856 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 SFTPA1Q8IWL2 248 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 ZNF843Q8N446 348 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 SYT2Q8N9I0 419 aaPredicted RBP10.85□□□□□ -0.67
CHMP6-203ENST00000572525 NSUN7Q8NE18 718 aaKnown RBP10.85□□□□□ -0.67
CHMP6-203ENST00000572525 GDAP2Q9NXN4 497 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 TRPM5Q9NZQ8 1165 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 ODF2LQ9ULJ1 636 aa10.85□□□□□ -0.67
CHMP6-203ENST00000572525 ARID1BQ8NFD5 2236 aaPredicted RBP10.85□□□□□ -0.67
CHMP6-203ENST00000572525 A0A1W2PQF6 199 aa10.84□□□□□ -0.67
CHMP6-203ENST00000572525 E2F8A0AVK6 867 aa10.84□□□□□ -0.67
CHMP6-203ENST00000572525 GFRA2O00451 464 aa10.84□□□□□ -0.67
CHMP6-203ENST00000572525 NDUFS2O75306 463 aa10.84□□□□□ -0.67
CHMP6-203ENST00000572525 MATKP42679 507 aa10.84□□□□□ -0.67
CHMP6-203ENST00000572525 SLC6A11P48066 632 aa10.84□□□□□ -0.67
CHMP6-203ENST00000572525 LHX1P48742 406 aa10.84□□□□□ -0.67
CHMP6-203ENST00000572525 NOP14P78316 857 aaKnown RBP10.84□□□□□ -0.67
CHMP6-203ENST00000572525 ZNF174Q15697 407 aa10.84□□□□□ -0.67
CHMP6-203ENST00000572525 PTPRNQ16849 979 aa10.84□□□□□ -0.67
CHMP6-203ENST00000572525 TTC38Q5R3I4 469 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms