RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 HESX1Q9UBX0 185 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 LRFN2Q9ULH4 789 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 NME7Q9Y5B8 376 aa18.2■□□□□ 0.5
RPAIN-208ENST00000571043 KRT7P08729 469 aa18.19■□□□□ 0.5
RPAIN-208ENST00000571043 GNL1P36915 607 aaPredicted RBP18.19■□□□□ 0.5
RPAIN-208ENST00000571043 MLH1P40692 756 aa18.19■□□□□ 0.5
RPAIN-208ENST00000571043 MTMR3Q13615 1198 aa18.19■□□□□ 0.5
RPAIN-208ENST00000571043 SPDYCQ5MJ68 293 aa18.19■□□□□ 0.5
RPAIN-208ENST00000571043 GLB1LQ6UWU2 654 aa18.19■□□□□ 0.5
RPAIN-208ENST00000571043 APPL2Q8NEU8 664 aa18.19■□□□□ 0.5
RPAIN-208ENST00000571043 RUFY1Q96T51 708 aa18.19■□□□□ 0.5
RPAIN-208ENST00000571043 TRIM31Q9BZY9 425 aa18.19■□□□□ 0.5
RPAIN-208ENST00000571043 SNX25Q9H3E2 840 aa18.19■□□□□ 0.5
RPAIN-208ENST00000571043 ZDHHC18Q9NUE0 388 aa18.19■□□□□ 0.5
RPAIN-208ENST00000571043 HOXA2O43364 376 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 HUS1O60921 280 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 LRCH4O75427 683 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 TJP3O95049 919 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 FGFR1P11362 822 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 TCF4P15884 667 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 WARSP23381 471 aaKnown RBP18.18■□□□□ 0.5
RPAIN-208ENST00000571043 GJC1P36383 396 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 MAGEA10P43363 369 aaPredicted RBP18.18■□□□□ 0.5
RPAIN-208ENST00000571043 LILRA4P59901 499 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 DEFB103AP81534 67 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 SLC25A11Q02978 314 aaKnown RBP18.18■□□□□ 0.5
RPAIN-208ENST00000571043 TERF2Q15554 542 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 ATP13A4Q4VNC1 1196 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 ODF2Q5BJF6 829 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 FAM102AQ5T9C2 384 aaPredicted RBP18.18■□□□□ 0.5
RPAIN-208ENST00000571043 SPOCD1Q6ZMY3 1216 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 TMEM110Q86TL2 294 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 TTC30AQ86WT1 665 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 ZDHHC17Q8IUH5 632 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 ATL2Q8NHH9 583 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 SLC35F5Q8WV83 523 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 RSPH1Q8WYR4 309 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 RNF25Q96BH1 459 aaPredicted RBP18.18■□□□□ 0.5
RPAIN-208ENST00000571043 FMO2Q99518 471 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 HEMGNQ9BXL5 484 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 CHST7Q9NS84 486 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 ASNSD1Q9NWL6 643 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 GRHL1Q9NZI5 618 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 KANSL3Q9P2N6 904 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 EFR3BQ9Y2G0 817 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 SNX24Q9Y343 169 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 GOLGA8KD6RF30 607 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 E5RJQ4 531 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 THP07101 528 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 PCK1P35558 622 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 KCNJ1P48048 391 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 ZNF143P52747 638 aaPredicted RBP18.18■□□□□ 0.5
RPAIN-208ENST00000571043 RASIP1Q5U651 963 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 OR6B2Q6IFH4 312 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 MFSD7Q6UXD7 560 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 LRIG3Q6UXM1 1119 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 GOLGA6L1Q8N7Z2 621 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 ANKRD52Q8NB46 1076 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 PIK3R5Q8WYR1 880 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 TNIP3Q96KP6 325 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 CASD1Q96PB1 797 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 ZIM3Q96PE6 472 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 GOLGA2P5Q9HBQ8 144 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 CYLDQ9NQC7 956 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 CXXC1Q9P0U4 656 aaPredicted RBP18.18■□□□□ 0.5
RPAIN-208ENST00000571043 FAN1Q9Y2M0 1017 aa18.18■□□□□ 0.5
RPAIN-208ENST00000571043 SCN1AP35498 2009 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 RANBP2P49792 3224 aaKnown RBP18.17■□□□□ 0.5
RPAIN-208ENST00000571043 ZBBXA8MT70 800 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 RNF40O75150 1001 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 PPFIA2O75334 1257 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 DGKIO75912 1065 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 RNF8O76064 485 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 UPP2O95045 317 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 GAS8O95995 478 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 GPD1P21695 349 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 RPL21P46778 160 aaKnown RBP18.17■□□□□ 0.5
RPAIN-208ENST00000571043 SCNN1GP51170 649 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 PTK6Q13882 451 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 LLGL1Q15334 1064 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 PPP1R7Q15435 360 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 NOMO2Q5JPE7 1267 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 ZFYVE27Q5T4F4 411 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 DRICH1Q6PGQ1 229 aaPredicted RBP18.17■□□□□ 0.5
RPAIN-208ENST00000571043 ZDHHC24Q6UX98 284 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 FAM183BPQ6ZVS7 135 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 TMC3Q7Z5M5 1100 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 ANKS1BQ7Z6G8 1248 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 ADGRF2Q8IZF7 708 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 ARFGAP1Q8N6T3 406 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 EMC1Q8N766 993 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 PKNOX2Q96KN3 472 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 CNPY3Q9BT09 278 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 TXLNGYQ9BZA5 131 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 FAM49BQ9NUQ9 324 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 VPS18Q9P253 973 aa18.17■□□□□ 0.5
RPAIN-208ENST00000571043 R3HDM2Q9Y2K5 976 aaKnown RBP18.17■□□□□ 0.5
RPAIN-208ENST00000571043 hCG_1818297A0A087WSY0 165 aa18.16■□□□□ 0.5
RPAIN-208ENST00000571043 C2CD4BA6NLJ0 364 aa18.16■□□□□ 0.5
RPAIN-208ENST00000571043 PI4K2BG5E9Z4 385 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms