RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 FUKQ8N0W3 1084 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 ELMOD1Q8N336 334 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 ANKRD52Q8NB46 1076 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 ACRBPQ8NEB7 543 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 ARMC2Q8NEN0 867 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 UBA3Q8TBC4 463 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 CPA5Q8WXQ8 436 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 DDX1Q92499 740 aaKnown RBP6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 GOLGA1Q92805 767 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZNF830Q96NB3 372 aaPredicted RBP6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 TMEM209Q96SK2 561 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 EIF3CQ99613 913 aaKnown RBP6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 RTP3Q9BQQ7 232 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 C11orf70Q9BRQ4 267 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 DESI2Q9BSY9 194 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 B3GNT5Q9BYG0 378 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 LHX5Q9H2C1 402 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 KCNF1Q9H3M0 494 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 LRRC4Q9HBW1 653 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 PRM3Q9NNZ6 103 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 FNIP2Q9P278 1114 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 AFF4Q9UHB7 1163 aaKnown RBP6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 DPP7Q9UHL4 492 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 NAGPAQ9UK23 515 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 GPSM3Q9Y4H4 160 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 EPN1Q9Y6I3 576 aaPredicted RBP6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 SCINQ9Y6U3 715 aa6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 TDRD15B5MCY1 1934 aaKnown RBP6.95□□□□□ -1.3
CTDNEP1-204ENST00000570484 TET1Q8NFU7 2136 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 WDR27A2RRH5 827 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 GOLGA6L9A6NEM1 432 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 F8VP50 259 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 CLDN5O00501 218 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 DDX3XO00571 662 aaKnown RBP eCLIP6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 GRM6O15303 877 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 TEX28O15482 410 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 SART1O43290 800 aaKnown RBP6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 KRT86O43790 486 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 RTN2O75298 545 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 EFEMP2O95967 443 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 LRG1P02750 347 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 CNPP09543 421 aaKnown RBP6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 H2AFZP0C0S5 128 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 GZMAP12544 262 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 CHRNB2P17787 502 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 MAGEA1P43355 309 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 MAGEA11P43364 429 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 PLA2G4AP47712 749 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 ALDH1A3P47895 512 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 TUFMP49411 452 aaKnown RBP6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 RGS7P49802 495 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 CDR1P51861 262 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 VAV2P52735 878 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 NAP1L1P55209 391 aaKnown RBP6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 PDE4CQ08493 712 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 KIF5AQ12840 1032 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 IFRD2Q12894 506 aaPredicted RBP6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 RAB33AQ14088 237 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 MRPL58Q14197 206 aaKnown RBP6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 MTF1Q14872 753 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 IFI16Q16666 785 aaKnown RBP6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 LRIT3Q3SXY7 679 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 KIAA0319Q5VV43 1072 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 ACAD10Q6JQN1 1059 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 DNAJC24Q6P3W2 148 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 FAM171BQ6P995 826 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 MMS22LQ6ZRQ5 1243 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 CLEC20AQ6ZU45 233 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 TOGARAM2Q6ZUX3 1019 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 H2AFVQ71UI9 128 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 SPRED2Q7Z698 418 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 TTC30AQ86WT1 665 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 PALB2Q86YC2 1186 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 ATAD1Q8NBU5 361 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 SLC30A5Q8TAD4 765 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZNF461Q8TAF7 563 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 SPPL3Q8TCT6 385 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 PPP1R13BQ96KQ4 1090 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 LPIN3Q9BQK8 851 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 SYT11Q9BT88 431 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 TRIM62Q9BVG3 475 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 DUSP16Q9BY84 665 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 RHOBTB2Q9BYZ6 727 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 ZNF576Q9H609 170 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 CYP4F11Q9HBI6 524 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 RXFP1Q9HBX9 757 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 PNPLA8Q9NP80 782 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 EHD2Q9NZN4 543 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 ADAM22Q9P0K1 906 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 MAFFQ9ULX9 164 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 PPP2R2CQ9Y2T4 447 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 YIPF1Q9Y548 306 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 NME7Q9Y5B8 376 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 IRAK3Q9Y616 596 aa6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 FNDC1Q4ZHG4 1894 aaPredicted RBP6.94□□□□□ -1.3
CTDNEP1-204ENST00000570484 MKI67P46013 3256 aaKnown RBP6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 C2orf71A6NGG8 1288 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 E5RJQ4 531 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 GOLGA8SH3BPF8 625 aa6.93□□□□□ -1.3
CTDNEP1-204ENST00000570484 FSCN2O14926 492 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms