RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 GABRB2P47870 512 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 SMAD3P84022 425 aaKnown RBP16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 ADIGQ0VDE8 80 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 DUSP4Q13115 394 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 MGAT5BQ3V5L5 792 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 FAM183BPQ6ZVS7 135 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 TMEM110Q86TL2 294 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 TIFAQ96CG3 184 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 C8orf48Q96LL4 319 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 KLHL5Q96PQ7 755 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 NUP85Q9BW27 656 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 UBXN6Q9BZV1 441 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 CRISPLD1Q9H336 500 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 PNPLA8Q9NP80 782 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 SLC27A5Q9Y2P5 690 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 PAXBP1Q9Y5B6 917 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 PCDHGC5Q9Y5F6 944 aa16.24■□□□□ 0.19
HERPUD1-219ENST00000570273 C2orf71A6NGG8 1288 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 HHLA1C9JL84 531 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 GABBR2O75899 941 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 SOAT2O75908 522 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 RPL34P49207 117 aaKnown RBP16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 GPR15P49685 360 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 TKTL1P51854 596 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 GSCP56915 257 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 ZNF268Q14587 947 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 FAM102AQ5T9C2 384 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 SDHAF4Q5VUM1 108 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 PLEKHA7Q6IQ23 1121 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 GPRIN1Q7Z2K8 1008 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 C3orf20Q8ND61 904 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 ZNF461Q8TAF7 563 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 SLC35G2Q8TBE7 412 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 ZNF564Q8TBZ8 553 aaPredicted RBP16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 GDPD5Q8WTR4 605 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 SELENOOQ9BVL4 669 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 PARVAQ9NVD7 372 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 UVRAGQ9P2Y5 699 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 SALL4Q9UJQ4 1053 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 IRAK3Q9Y616 596 aa16.23■□□□□ 0.19
HERPUD1-219ENST00000570273 HIDE1A8MVS5 230 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 PAPSS1O43252 624 aaPredicted RBP16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 KIF5CO60282 957 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 ABLIM3O94929 683 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 MOCS3O95396 460 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 GJB6O95452 261 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 ELF1P32519 619 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 IRS1P35568 1242 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 RPL10AP62906 217 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 MAMLD1Q13495 774 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 IFI16Q16666 785 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 DDR2Q16832 855 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 MRPL43Q8N983 215 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 MCRS1Q96EZ8 462 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 ULBP1Q9BZM6 244 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 CYP4F11Q9HBI6 524 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 MRPL47Q9HD33 250 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 OSGEPQ9NPF4 335 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 METTL5Q9NRN9 209 aaKnown RBP16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 COG5Q9UP83 839 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 YIPF1Q9Y548 306 aa16.22■□□□□ 0.19
HERPUD1-219ENST00000570273 PTPRDP23468 1912 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 PRRG1O14668 218 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 FBXO21O94952 628 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 SEC24AO95486 1093 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 ATF2P15336 505 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 KLRC2P26717 231 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 TUFMP49411 452 aaKnown RBP16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 SLC5A3P53794 718 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 IFRD2Q12894 506 aaPredicted RBP16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 CAMK1Q14012 370 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 TCEAL1Q15170 157 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 RAB41Q5JT25 222 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 PDE12Q6L8Q7 609 aaKnown RBP16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 DCUN1D2Q6PH85 259 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 OLFML1Q6UWY5 402 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 ZDHHC17Q8IUH5 632 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 RNF10Q8N5U6 811 aaKnown RBP16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 C16orf45Q96MC5 204 aaPredicted RBP16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 MCEEQ96PE7 176 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 ALS2CR12Q96Q35 445 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 LMAN2LQ9H0V9 348 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 ANAPC7Q9UJX3 599 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 MAFFQ9ULX9 164 aa16.21■□□□□ 0.19
HERPUD1-219ENST00000570273 TCRBV5S1A1TA0A578 114 aa16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 EPOPA6NHQ4 379 aa16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 SOX1O00570 391 aaPredicted RBP16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 MTA2O94776 668 aa16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 GLUD1P00367 558 aa16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 SLC6A3Q01959 620 aa16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 SCUBE3Q8IX30 993 aa16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 STKLD1Q8NE28 680 aa16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 TPCN2Q8NHX9 752 aa16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 CLEC4CQ8WTT0 213 aa16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 PIWIL1Q96J94 861 aaKnown RBP16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 SPATA17Q96L03 361 aa16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 IRX2Q9BZI1 471 aaPredicted RBP16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 CNGB3Q9NQW8 809 aa16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 HSFX1Q9UBD0 423 aa16.2■□□□□ 0.18
HERPUD1-219ENST00000570273 CAPN6Q9Y6Q1 641 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms