RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 MTMR6Q9Y217 621 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 PCDHA3Q9Y5H8 950 aa7.88□□□□□ -1.15
CNOT1-222ENST00000570139 ATAD5Q96QE3 1844 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 CNTNAP1P78357 1384 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 ZNF541Q9H0D2 1346 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 DDTLA6NHG4 134 aaPredicted RBP7.87□□□□□ -1.15
CNOT1-222ENST00000570139 FAM163BP0C2L3 166 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 H2AFB1P0C5Y9 115 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 H2AFB2P0C5Z0 115 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 FTH1P19P0C7X4 201 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 HSPA7P48741 367 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 FMO1Q01740 532 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 TCP10Q12799 353 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 MAN2A1Q16706 1144 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 HYIQ5T013 277 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 GPATCH4Q5T3I0 446 aaKnown RBP7.87□□□□□ -1.15
CNOT1-222ENST00000570139 ETV3LQ6ZN32 361 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 PDZD4Q76G19 769 aaPredicted RBP7.87□□□□□ -1.15
CNOT1-222ENST00000570139 ZC3H18Q86VM9 953 aaKnown RBP7.87□□□□□ -1.15
CNOT1-222ENST00000570139 RNF152Q8N8N0 203 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 SLC44A5Q8NCS7 719 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 FBXO18Q8NFZ0 1043 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 BRIX1Q8TDN6 353 aaKnown RBP7.87□□□□□ -1.15
CNOT1-222ENST00000570139 CCDC12Q8WUD4 166 aaPredicted RBP7.87□□□□□ -1.15
CNOT1-222ENST00000570139 CYFIP2Q96F07 1278 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 CEP95Q96GE4 821 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 TMEM47Q9BQJ4 181 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 FDXACB1Q9BRP7 624 aaPredicted RBP7.87□□□□□ -1.15
CNOT1-222ENST00000570139 SPZ1Q9BXG8 430 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 SLC26A6Q9BXS9 759 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 SCAND2PQ9GZW5 306 aaPredicted RBP7.87□□□□□ -1.15
CNOT1-222ENST00000570139 SH3GLB2Q9NR46 395 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 PIH1D1Q9NWS0 290 aaKnown RBP7.87□□□□□ -1.15
CNOT1-222ENST00000570139 RRN3Q9NYV6 651 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 CFAP45Q9UL16 551 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 SLC5A6Q9Y289 635 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 ZDHHC9Q9Y397 364 aa7.87□□□□□ -1.15
CNOT1-222ENST00000570139 ELP1O95163 1332 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 DOCK1Q14185 1865 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 A0A1W2PPC4 97 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 CLRN2A0PK11 232 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 LRRC14BA6NHZ5 514 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 PRR19A6NJB7 356 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 TCP10L2B9ZVM9 353 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 MPHOSPH10O00566 681 aaKnown RBP7.86□□□□□ -1.15
CNOT1-222ENST00000570139 PSPNO60542 156 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 MBD3O95983 291 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 HPXP02790 462 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 KITP10721 976 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 FDPSP14324 419 aaKnown RBP7.86□□□□□ -1.15
CNOT1-222ENST00000570139 AKR1B1P15121 316 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 RAC2P15153 192 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 NKX3-2P78367 333 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 GRM1Q13255 1194 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 PKP1Q13835 747 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 SEPT2Q15019 361 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 ARL13BQ3SXY8 428 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 GADL1Q6ZQY3 521 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 RFX8Q6ZV50 586 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 NBPF11Q86T75 865 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 SH2D3CQ8N5H7 860 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 MSL3Q8N5Y2 521 aaKnown RBP7.86□□□□□ -1.15
CNOT1-222ENST00000570139 GMCL1P1Q8NEA9 526 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 CCDC148Q8NFR7 591 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 DYDC2Q96IM9 177 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 PPM1MQ96MI6 270 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 ZNF396Q96N95 335 aaPredicted RBP7.86□□□□□ -1.15
CNOT1-222ENST00000570139 PPP1R16BQ96T49 567 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 DNAJC18Q9H819 358 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 SERHLQ9NQF3 203 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 ADARB2Q9NS39 739 aaKnown RBP7.86□□□□□ -1.15
CNOT1-222ENST00000570139 POLR3BQ9NW08 1133 aaPredicted RBP7.86□□□□□ -1.15
CNOT1-222ENST00000570139 RNF181Q9P0P0 153 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 AFF4Q9UHB7 1163 aaKnown RBP7.86□□□□□ -1.15
CNOT1-222ENST00000570139 FBXO2Q9UK22 296 aaPredicted RBP7.86□□□□□ -1.15
CNOT1-222ENST00000570139 WDR90Q96KV7 1748 aa7.86□□□□□ -1.15
CNOT1-222ENST00000570139 GOLGA6L3A6NEY3 463 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 SMIM22K7EJ46 135 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 NMT2O60551 498 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 PAPLNO95428 1278 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 CNOT4O95628 575 aaKnown RBP7.85□□□□□ -1.15
CNOT1-222ENST00000570139 MPOP05164 745 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 ASNSP08243 561 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 DHRS4L1P0CG22 281 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 SNHG28P0DPA3 235 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 EN2P19622 333 aaPredicted RBP7.85□□□□□ -1.15
CNOT1-222ENST00000570139 CTSSP25774 331 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 CALML3P27482 149 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 CD96P40200 585 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 ALDH9A1P49189 494 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 PRELPP51888 382 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 TMEM62Q0P6H9 643 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 TRAF1Q13077 416 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 PRKG1Q13976 671 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 MPEG1Q2M385 716 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 KHDC1Q4VXA5 237 aaKnown RBP7.85□□□□□ -1.15
CNOT1-222ENST00000570139 GALNT17Q6IS24 598 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 SESTD1Q86VW0 696 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 ZFPM1Q8IX07 1006 aa7.85□□□□□ -1.15
CNOT1-222ENST00000570139 PPP1R14CQ8TAE6 165 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms