RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 SOX9P48436 509 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 PPP3CCP48454 512 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 MLLT6P55198 1093 aaPredicted RBP13.81□□□□□ -0.2
CNOT1-220ENST00000569916 MARSP56192 900 aaKnown RBP13.81□□□□□ -0.2
CNOT1-220ENST00000569916 TNK2Q07912 1038 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 FZD5Q13467 585 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 ZNF77Q15935 545 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 ZNF394Q53GI3 561 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 CLEC20AQ6ZU45 233 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 TRIM59Q8IWR1 403 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 ZNF687Q8N1G0 1237 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 TTC39CQ8N584 583 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 SCAMP5Q8TAC9 235 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 FBXO32Q969P5 355 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 CYFIP2Q96F07 1278 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 MSANTD3Q96H12 275 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 SLITRK1Q96PX8 696 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 MED15Q96RN5 788 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 FAM83CQ9BQN1 747 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 FAM124BQ9H5Z6 455 aaPredicted RBP13.81□□□□□ -0.2
CNOT1-220ENST00000569916 LMBRD1Q9NUN5 540 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 FAM86C1Q9NVL1 165 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 THG1LQ9NWX6 298 aaKnown RBP13.81□□□□□ -0.2
CNOT1-220ENST00000569916 GTSE1Q9NYZ3 720 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 IL37Q9NZH6 218 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 RWDD2AQ9UIY3 292 aa13.81□□□□□ -0.2
CNOT1-220ENST00000569916 MRPS17Q9Y2R5 130 aaKnown RBP13.81□□□□□ -0.2
CNOT1-220ENST00000569916 FANCMQ8IYD8 2048 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 FAM92AA1XBS5 289 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 HHLA1C9JL84 531 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 GNA14O95837 355 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 OAS1P00973 400 aaKnown RBP13.8□□□□□ -0.2
CNOT1-220ENST00000569916 TCF3P15923 654 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 HDCP19113 662 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 CTHP32929 405 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 PDE6CP51160 858 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 RAD23BP54727 409 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 MAP3K7CLP57077 242 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 ZXDBP98169 803 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 CUL2Q13617 745 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 MTF1Q14872 753 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 ANGPT1Q15389 498 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 PPP1R26Q5T8A7 1209 aaPredicted RBP13.8□□□□□ -0.2
CNOT1-220ENST00000569916 TRIM68Q6AZZ1 485 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 UBR7Q8N806 425 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 SLC4A11Q8NBS3 891 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 PDZD8Q8NEN9 1154 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 TTC8Q8TAM2 541 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 OVCA2Q8WZ82 227 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 FAM3CQ92520 227 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 CLDN23Q96B33 292 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 NELL2Q99435 816 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 PHOX2BQ99453 314 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 SRRTQ9BXP5 876 aaKnown RBP13.8□□□□□ -0.2
CNOT1-220ENST00000569916 IRF2BPLQ9H1B7 796 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 NUP62CLQ9H1M0 184 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 C8orf33Q9H7E9 229 aaPredicted RBP13.8□□□□□ -0.2
CNOT1-220ENST00000569916 HPS4Q9NQG7 708 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 GKN1Q9NS71 199 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 COMMD8Q9NX08 183 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 NDRG2Q9UN36 371 aaKnown RBP13.8□□□□□ -0.2
CNOT1-220ENST00000569916 ARHGAP26Q9UNA1 814 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 KIAA1549LQ6ZVL6 1849 aa13.8□□□□□ -0.2
CNOT1-220ENST00000569916 SPECC1L-ADORA2AF8WAN1 911 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 P4HA2O15460 535 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 MAGEA9P43362 315 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 RPS9P46781 194 aaKnown RBP13.79□□□□□ -0.2
CNOT1-220ENST00000569916 KPNA1P52294 538 aaPredicted RBP13.79□□□□□ -0.2
CNOT1-220ENST00000569916 SLC7A9P82251 487 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 LRMPQ12912 555 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 ITPRIPL2Q3MIP1 535 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 TXNDC11Q6PKC3 985 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 GPRIN1Q7Z2K8 1008 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 RALGPS2Q86X27 583 aaPredicted RBP13.79□□□□□ -0.2
CNOT1-220ENST00000569916 MLKLQ8NB16 471 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 LMO3Q8TAP4 145 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 SH3RF2Q8TEC5 729 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 ATOH1Q92858 354 aaPredicted RBP13.79□□□□□ -0.2
CNOT1-220ENST00000569916 JAKMIP2Q96AA8 810 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 TMEM176AQ96HP8 235 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 IPO9Q96P70 1041 aaKnown RBP13.79□□□□□ -0.2
CNOT1-220ENST00000569916 DNAI2Q9GZS0 605 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 RNF38Q9H0F5 515 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 EBF3Q9H4W6 596 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 PNPLA8Q9NP80 782 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 GMIPQ9P107 970 aa13.79□□□□□ -0.2
CNOT1-220ENST00000569916 OTOL1A6NHN0 477 aaPredicted RBP13.78□□□□□ -0.2
CNOT1-220ENST00000569916 NCAM2O15394 837 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 ABL1P00519 1130 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 ZDHHC11BP0C7U3 371 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 ARSAP15289 507 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 TBXAS1P24557 533 aaPredicted RBP13.78□□□□□ -0.2
CNOT1-220ENST00000569916 KCNH2Q12809 1159 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 RUNX3Q13761 415 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 DPCR1Q3MIW9 517 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 SNX30Q5VWJ9 437 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 ARHGAP17Q68EM7 881 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 CC2D1AQ6P1N0 951 aaPredicted RBP13.78□□□□□ -0.2
CNOT1-220ENST00000569916 C1orf228Q6PIY5 440 aa13.78□□□□□ -0.2
CNOT1-220ENST00000569916 TTC16Q8NEE8 873 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms