RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 EHHADHQ08426 723 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 BIRC3Q13489 604 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 DMC1Q14565 340 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 ELF2Q15723 593 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 KNOP1Q1ED39 458 aaKnown RBP13.97□□□□□ -0.17
SPG7-221ENST00000569720 NAIF1Q69YI7 327 aaPredicted RBP13.97□□□□□ -0.17
SPG7-221ENST00000569720 IL31Q6EBC2 164 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 KBTBD6Q86V97 674 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 DDX42Q86XP3 938 aaKnown RBP eCLIP13.97□□□□□ -0.17
SPG7-221ENST00000569720 C12orf56Q8IXR9 622 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 ZC3H10Q96K80 434 aaKnown RBP13.97□□□□□ -0.17
SPG7-221ENST00000569720 SCAND2PQ9GZW5 306 aaPredicted RBP13.97□□□□□ -0.17
SPG7-221ENST00000569720 PCDHGA5Q9Y5G8 931 aa13.97□□□□□ -0.17
SPG7-221ENST00000569720 RHOBTB1O94844 696 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 RTN3O95197 1032 aaPredicted RBP13.96□□□□□ -0.17
SPG7-221ENST00000569720 CASP1P29466 404 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 MYL6P60660 151 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 IFRD2Q12894 506 aaPredicted RBP13.96□□□□□ -0.17
SPG7-221ENST00000569720 TAF10Q12962 218 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 CUL4BQ13620 913 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 ZNF667Q5HYK9 610 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 PPM1JQ5JR12 505 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 RESP18Q5W5W9 173 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 NUP93Q8N1F7 819 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 B3GALNT2Q8NCR0 500 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 PDZD8Q8NEN9 1154 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 ZNF516Q92618 1163 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 ZNF518BQ9C0D4 1074 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 EBF1Q9UH73 591 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 PCDHA7Q9UN72 937 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 ZDHHC9Q9Y397 364 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 CPQQ9Y646 472 aa13.96□□□□□ -0.17
SPG7-221ENST00000569720 TPRP12270 2363 aaKnown RBP13.95□□□□□ -0.18
SPG7-221ENST00000569720 ADRB1P08588 477 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 MBL2P11226 248 aaPredicted RBP13.95□□□□□ -0.18
SPG7-221ENST00000569720 YWHAQP27348 245 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 DGKEP52429 567 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 LIMK1P53667 647 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 KRT85P78386 507 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 SF3A2Q15428 464 aaKnown RBP13.95□□□□□ -0.18
SPG7-221ENST00000569720 ZNF699Q32M78 642 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 PLK5Q496M5 336 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 FILIP1Q7Z7B0 1213 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 C11orf74Q86VG3 221 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 TSTD1Q8NFU3 115 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 OVCA2Q8WZ82 227 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 EZH1Q92800 747 aaPredicted RBP13.95□□□□□ -0.18
SPG7-221ENST00000569720 FBXO32Q969P5 355 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 TNIP3Q96KP6 325 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 GBP4Q96PP9 640 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 MED10Q9BTT4 135 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 B3GNT5Q9BYG0 378 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 RNF38Q9H0F5 515 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 DPEP3Q9H4B8 488 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 VRTNQ9H8Y1 702 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 VPS45Q9NRW7 570 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 EXOC1Q9NV70 894 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 POLR3BQ9NW08 1133 aaPredicted RBP13.95□□□□□ -0.18
SPG7-221ENST00000569720 SMPD4Q9NXE4 827 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 NME7Q9Y5B8 376 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 MYOFQ9NZM1 2061 aa13.95□□□□□ -0.18
SPG7-221ENST00000569720 CNOT1A5YKK6 2376 aaKnown RBP13.94□□□□□ -0.18
SPG7-221ENST00000569720 CLDN5O00501 218 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 OLFM2O95897 454 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 ADH1CP00326 375 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 OAS1P00973 400 aaKnown RBP13.94□□□□□ -0.18
SPG7-221ENST00000569720 CYP17A1P05093 508 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 P4HA1P13674 534 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 TRIM21P19474 475 aaKnown RBP13.94□□□□□ -0.18
SPG7-221ENST00000569720 KCNA4P22459 653 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 MPLP40238 635 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 OPRD1P41143 372 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 SEC13P55735 322 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 ZXDBP98169 803 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 CCDC6Q16204 474 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 USP39Q53GS9 565 aaKnown RBP13.94□□□□□ -0.18
SPG7-221ENST00000569720 C2orf27AQ580R0 203 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 ADGRG2Q8IZP9 1017 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 PARD3BQ8TEW8 1205 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 USP33Q8TEY7 942 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 NUP205Q92621 2012 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 CNTNAP3BQ96NU0 1288 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 CNTNAP3Q9BZ76 1288 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 XYLT2Q9H1B5 865 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 DUSP15Q9H1R2 295 aaPredicted RBP13.94□□□□□ -0.18
SPG7-221ENST00000569720 SMYD3Q9H7B4 428 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 CFAP97Q9P2B7 532 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 TBC1D14Q9P2M4 693 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 THADAQ6YHU6 1953 aa13.94□□□□□ -0.18
SPG7-221ENST00000569720 ACACBO00763 2458 aa13.93□□□□□ -0.18
SPG7-221ENST00000569720 LRRIQ3A6PVS8 624 aaPredicted RBP13.93□□□□□ -0.18
SPG7-221ENST00000569720 K7EQS6 105 aa13.93□□□□□ -0.18
SPG7-221ENST00000569720 ALDH1A2O94788 518 aa13.93□□□□□ -0.18
SPG7-221ENST00000569720 APODP05090 189 aa13.93□□□□□ -0.18
SPG7-221ENST00000569720 SLFN14P0C7P3 912 aa13.93□□□□□ -0.18
SPG7-221ENST00000569720 GBP1P32455 592 aa13.93□□□□□ -0.18
SPG7-221ENST00000569720 EIF2DP41214 584 aaKnown RBP13.93□□□□□ -0.18
SPG7-221ENST00000569720 CASP4P49662 377 aa13.93□□□□□ -0.18
SPG7-221ENST00000569720 CACNA2D1P54289 1103 aa13.93□□□□□ -0.18
SPG7-221ENST00000569720 CDH8P55286 799 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms