RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 CPA6Q8N4T0 437 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 TAS1R2Q8TE23 839 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 SMARCE1Q969G3 411 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 TIGD1Q96MW7 591 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 TSG101Q99816 390 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 GTPBP4Q9BZE4 634 aaKnown RBP15.33■□□□□ 0.04
CMTM3-215ENST00000568477 NIF3L1Q9GZT8 377 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 TMEM8AQ9HCN3 771 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.33■□□□□ 0.04
CMTM3-215ENST00000568477 KRT82Q9NSB4 513 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 DUS2Q9NX74 493 aaKnown RBP15.33■□□□□ 0.04
CMTM3-215ENST00000568477 HMGXB4Q9UGU5 601 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 WNT6Q9Y6F9 365 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 SPTBN4Q9H254 2564 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 WDR87Q6ZQQ6 2873 aa15.33■□□□□ 0.04
CMTM3-215ENST00000568477 STX10O60499 249 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 AP1G2O75843 785 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 CCDC130P13994 396 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 TCF3P15923 654 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 YWHAQP27348 245 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 CXCL12P48061 93 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 ORC1Q13415 861 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 CCINQ13939 588 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 GAS6Q14393 721 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 COBLL1Q53SF7 1204 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 WDR44Q5JSH3 913 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 Q6ZS52 159 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 PAQR9Q6ZVX9 377 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 FUKQ8N0W3 1084 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 CRYBG2Q8N1P7 616 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 SYNPOQ8N3V7 929 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 ZBTB44Q8NCP5 570 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 PDZD8Q8NEN9 1154 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 OSCP1Q8WVF1 389 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 NELL1Q92832 810 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 ATP2A3Q93084 1043 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 FBXO32Q969P5 355 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 EEF2KMTQ96G04 330 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 KCNK16Q96T55 309 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 CYP3A43Q9HB55 503 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 PCDHA5Q9Y5H7 936 aa15.32■□□□□ 0.04
CMTM3-215ENST00000568477 ZNF292O60281 2723 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 OTOL1A6NHN0 477 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-215ENST00000568477 MXI1P50539 228 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 SLC5A3P53794 718 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 NRLP54845 237 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 SLC7A9P82251 487 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 SATB1Q01826 763 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 INCA1Q0VD86 236 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 GRSF1Q12849 480 aaKnown RBP eCLIP15.31■□□□□ 0.04
CMTM3-215ENST00000568477 KRT39Q6A163 491 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 SPATA20Q8TB22 786 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 SLC2A14Q8TDB8 520 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 OVCA2Q8WZ82 227 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 ERCC4Q92889 916 aaPredicted RBP15.31■□□□□ 0.04
CMTM3-215ENST00000568477 EXOC4Q96A65 974 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 NT5C1AQ9BXI3 368 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 DNAI2Q9GZS0 605 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 ECT2Q9H8V3 914 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 APOBEC3GQ9HC16 384 aaKnown RBP15.31■□□□□ 0.04
CMTM3-215ENST00000568477 FAM49BQ9NUQ9 324 aa15.31■□□□□ 0.04
CMTM3-215ENST00000568477 GOLGA6L22H0YM25 854 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 LEFTY2O00292 366 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 TRDMT1O14717 391 aaKnown RBP15.3■□□□□ 0.04
CMTM3-215ENST00000568477 TNFRSF10BO14763 440 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 SLC16A3O15427 465 aaKnown RBP15.3■□□□□ 0.04
CMTM3-215ENST00000568477 LILRB5O75023 590 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 OLFM2O95897 454 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 OAS1P00973 400 aaKnown RBP15.3■□□□□ 0.04
CMTM3-215ENST00000568477 DMDP11532 3685 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 TDGF1P13385 188 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 GJA4P35212 333 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 MCCD1P59942 119 aaPredicted RBP15.3■□□□□ 0.04
CMTM3-215ENST00000568477 FKBP3Q00688 224 aaKnown RBP15.3■□□□□ 0.04
CMTM3-215ENST00000568477 LRRC63Q05C16 580 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 NR1H3Q13133 447 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 STIM1Q13586 685 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 EML3Q32P44 896 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 TMEM196Q5HYL7 178 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 FSTL4Q6MZW2 842 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 SUMF1Q8NBK3 374 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 SCAMP5Q8TAC9 235 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 CFAP54Q96N23 3096 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 SMOQ99835 787 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 HINFPQ9BQA5 517 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 COMMD8Q9NX08 183 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 CPQQ9Y646 472 aa15.3■□□□□ 0.04
CMTM3-215ENST00000568477 PSMA7O14818 248 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 CILPO75339 1184 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 PAPSS2O95340 614 aaPredicted RBP15.29■□□□□ 0.04
CMTM3-215ENST00000568477 NFATC1O95644 943 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 FAM200BP0CF97 657 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 MBL2P11226 248 aaPredicted RBP15.29■□□□□ 0.04
CMTM3-215ENST00000568477 CD58P19256 250 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 ADORA2BP29275 332 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 MAP3K7CLP57077 242 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 DCAF17Q5H9S7 520 aaPredicted RBP15.29■□□□□ 0.04
CMTM3-215ENST00000568477 TCERG1LQ5VWI1 586 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 ANKRD40Q6AI12 368 aa15.29■□□□□ 0.04
CMTM3-215ENST00000568477 DDX42Q86XP3 938 aaKnown RBP eCLIP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms