RNA–Protein interactions for RNA: ENST00000568413.1

RPAP1-211, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 3

Gene RPAP1, Length 586 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-211ENST00000568413 PPP3CCP48454 512 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 NTHL1P78549 312 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 PDE4CQ08493 712 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 SPECC1LQ69YQ0 1117 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 SLC47A2Q86VL8 602 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 TTC30AQ86WT1 665 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 ZNF677Q86XU0 584 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 ZMIZ2Q8NF64 920 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 UBA3Q8TBC4 463 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 RPGRIP1Q96KN7 1286 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 GCNAQ96QF7 691 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 ZSWIM1Q9BR11 485 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 TTLL2Q9BWV7 592 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 PHF7Q9BWX1 381 aaPredicted RBP9.39□□□□□ -0.91
RPAP1-211ENST00000568413 LRRC3Q9BY71 257 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 LHX5Q9H2C1 402 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 PDCL3Q9H2J4 239 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 FBXO44Q9H4M3 255 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 POMKQ9H5K3 350 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 ACP6Q9NPH0 428 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.39□□□□□ -0.91
RPAP1-211ENST00000568413 IL37Q9NZH6 218 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 CAPN11Q9UMQ6 739 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 PCDHGC3Q9UN70 934 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 MAGED2Q9UNF1 606 aaPredicted RBP9.39□□□□□ -0.91
RPAP1-211ENST00000568413 LUC7L2Q9Y383 392 aaKnown RBP9.39□□□□□ -0.91
RPAP1-211ENST00000568413 MRPS23Q9Y3D9 190 aaKnown RBP9.39□□□□□ -0.91
RPAP1-211ENST00000568413 NR2E1Q9Y466 385 aa9.39□□□□□ -0.91
RPAP1-211ENST00000568413 ZFP37Q9Y6Q3 630 aaPredicted RBP9.39□□□□□ -0.91
RPAP1-211ENST00000568413 MYO10Q9HD67 2058 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 SOBPA7XYQ1 873 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 HHLA1C9JL84 531 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 M0QYV0 167 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 F11P03951 625 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 TPM1P09493 284 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 GABRR2P28476 465 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 GPD2P43304 727 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 PDE6CP51160 858 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 KIF11P52732 1056 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 SLC5A3P53794 718 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 ZBED6P86452 979 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 MTMR3Q13615 1198 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 TRIM14Q14142 442 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 PKDCCQ504Y2 493 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 PRSS36Q5K4E3 855 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 SFMBT2Q5VUG0 894 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 OTOP3Q7RTS5 596 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 TMC8Q8IU68 726 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 VSTM4Q8IW00 320 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 PLCD3Q8N3E9 789 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 STK32AQ8WU08 396 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 SLC35F5Q8WV83 523 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 CPLX3Q8WVH0 158 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 KCTD13Q8WZ19 329 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 OVCA2Q8WZ82 227 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 BAP1Q92560 729 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 ACSF2Q96CM8 615 aaPredicted RBP9.38□□□□□ -0.91
RPAP1-211ENST00000568413 HSFY1Q96LI6 401 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 SLITRK1Q96PX8 696 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 PHOX2BQ99453 314 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 TTYH3Q9C0H2 523 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 ZNF334Q9HCZ1 680 aaPredicted RBP9.38□□□□□ -0.91
RPAP1-211ENST00000568413 GDE1Q9NZC3 331 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 AIPL1Q9NZN9 384 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 TRPM5Q9NZQ8 1165 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 ZMYM5Q9UJ78 669 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 USTQ9Y2C2 406 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 CEP83Q9Y592 693 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 ZDBF2Q9HCK1 2354 aa9.38□□□□□ -0.91
RPAP1-211ENST00000568413 FAM92AA1XBS5 289 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 LRRC53A6NM62 1247 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 LOC730098B7Z3J9 87 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 AP5Z1O43299 807 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 DDX6P26196 483 aaKnown RBP eCLIP9.37□□□□□ -0.91
RPAP1-211ENST00000568413 GBP2P32456 591 aaPredicted RBP9.37□□□□□ -0.91
RPAP1-211ENST00000568413 ACADSBP45954 432 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 PLA2G4AP47712 749 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 ZNF75DP51815 510 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 SNX16P57768 344 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 USP46P62068 366 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 ARID5AQ03989 594 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 TAF10Q12962 218 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 ASIC2Q16515 512 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 SLC5A9Q2M3M2 681 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 ARHGAP15Q53QZ3 475 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 RAB41Q5JT25 222 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 PMF1Q6P1K2 205 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 DENND1BQ6P3S1 775 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 GAREM2Q75VX8 874 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 IRF2BP2Q7Z5L9 587 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 NOP9Q86U38 636 aaKnown RBP9.37□□□□□ -0.91
RPAP1-211ENST00000568413 PIGZQ86VD9 579 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 TMEM35BQ8NCS4 154 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 PDZD8Q8NEN9 1154 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 SCAMP5Q8TAC9 235 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 ITFG1Q8TB96 612 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 SHKBP1Q8TBC3 707 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 EPS8L1Q8TE68 723 aa9.37□□□□□ -0.91
RPAP1-211ENST00000568413 DDX1Q92499 740 aaKnown RBP9.37□□□□□ -0.91
RPAP1-211ENST00000568413 MRPS31Q92665 395 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms