RNA–Protein interactions for RNA: ENST00000568394.1

AC009041.2-204, humanhuman

TSL 1 (best) BASIC

Gene AC009041.2, Length 3,343 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-204ENST00000568394 MRPL47Q9HD33 250 aaKnown RBP20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 C15orf38-AP3S2A0A0A6YYH1 394 aa20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 LYPLA1O75608 230 aaPredicted RBP20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 MTA2O94776 668 aa20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 GNA15P30679 374 aa20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 ACTR3P61158 418 aa20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 OTUD4Q01804 1114 aaKnown RBP20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 FOLH1Q04609 750 aa20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 PSMD6Q15008 389 aa20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 CDHR3Q6ZTQ4 885 aa20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 ARPINQ7Z6K5 226 aa20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 HELQQ8TDG4 1101 aa20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 LIN28AQ9H9Z2 209 aaKnown RBP20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 TUFT1Q9NNX1 390 aa20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 TMCO1Q9UM00 188 aa20.64■□□□□ 0.89
AC009041.2-204ENST00000568394 KBTBD13C9JR72 458 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 TM9SF1O15321 606 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 BSPRYQ5W0U4 402 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 HPS6Q86YV9 775 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 RFX6Q8HWS3 928 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 DEFB107AQ8IZN7 70 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 ERLEC1Q96DZ1 483 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 MRPL1Q9BYD6 325 aaKnown RBP20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 ARHGEF38Q9NXL2 777 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 ADAMTS6Q9UKP5 1117 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 HEMK1Q9Y5R4 338 aaPredicted RBP20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 AHDC1Q5TGY3 1603 aaPredicted RBP20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 TMCC1O94876 653 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 SLC15A2Q16348 729 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 NBPF12Q5TAG4 269 aaPredicted RBP20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 C16orf46Q6P387 395 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 CCDC33Q8N5R6 958 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 ZNF398Q8TD17 642 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 HSPH1Q92598 858 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 UQCRBP14927 111 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 HMGCS2P54868 508 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 ALLCQ8N6M5 410 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 S100A14Q9HCY8 104 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 NYAP2Q9P242 653 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 DTNAQ9Y4J8 743 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 MYH11P35749 1972 aa20.63■□□□□ 0.89
AC009041.2-204ENST00000568394 ZSCAN9O15535 394 aaPredicted RBP20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 KLF1Q13351 362 aaPredicted RBP20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 DNAJC24Q6P3W2 148 aa20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 HSPBAP1Q96EW2 488 aa20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 PLEKHG4BQ96PX9 1271 aa20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 INPP5FQ9Y2H2 1132 aa20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 WNT10BO00744 389 aa20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 DGKIO75912 1065 aa20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 TCN1P20061 433 aaPredicted RBP20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 CHN2P52757 468 aa20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 CEP55Q53EZ4 464 aa20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 RNASEH2BQ5TBB1 312 aaKnown RBP20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 ACAD11Q709F0 780 aa20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 TRIM42Q8IWZ5 723 aa20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 EXD1Q8NHP7 514 aa20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 VTI1AQ96AJ9 217 aa20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 FAM81BQ96LP2 452 aa20.62■□□□□ 0.89
AC009041.2-204ENST00000568394 STAMBPO95630 424 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 ITGB5P18084 799 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 ACOT2P49753 483 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 MAMLD1Q13495 774 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 EFHC2Q5JST6 749 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 SPOCD1Q6ZMY3 1216 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 NDUFAF2Q8N183 169 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 SIKE1Q9BRV8 207 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 TRIM56Q9BRZ2 755 aaKnown RBP20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 KCNH7Q9NS40 1196 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 SOX13Q9UN79 622 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 RIPK3Q9Y572 518 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 STK24Q9Y6E0 443 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 NT5C2P49902 561 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 VCPP55072 806 aaKnown RBP20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 CYLC2Q14093 348 aaPredicted RBP20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 ATG16L1Q676U5 607 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 LRRC8BQ6P9F7 803 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 C1orf228Q6PIY5 440 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 NCAPG2Q86XI2 1143 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 DCAF4Q8WV16 495 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 LZTS1Q9Y250 596 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 NOP56O00567 594 aaKnown RBP20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 FUT4P22083 530 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 PRKD1Q15139 912 aaPredicted RBP20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 CASC4Q6P4E1 433 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 TDRPQ86YL5 185 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 ATG4CQ96DT6 458 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 APOPT1Q96IL0 206 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 IWS1Q96ST2 819 aa20.61■□□□□ 0.89
AC009041.2-204ENST00000568394 H7C0C1 242 aa20.6■□□□□ 0.89
AC009041.2-204ENST00000568394 ZNF189O75820 626 aaPredicted RBP20.6■□□□□ 0.89
AC009041.2-204ENST00000568394 ATP5OP48047 213 aa20.6■□□□□ 0.89
AC009041.2-204ENST00000568394 OSTNP61366 133 aa20.6■□□□□ 0.89
AC009041.2-204ENST00000568394 UGCGQ16739 394 aa20.6■□□□□ 0.89
AC009041.2-204ENST00000568394 PPIL6Q8IXY8 311 aa20.6■□□□□ 0.89
AC009041.2-204ENST00000568394 SLITRK1Q96PX8 696 aa20.6■□□□□ 0.89
AC009041.2-204ENST00000568394 SUDS3Q9H7L9 328 aaPredicted RBP20.6■□□□□ 0.89
AC009041.2-204ENST00000568394 IL1RAPL1Q9NZN1 696 aa20.6■□□□□ 0.89
AC009041.2-204ENST00000568394 APOBEC2Q9Y235 224 aaKnown RBP20.6■□□□□ 0.89
AC009041.2-204ENST00000568394 PSTPIP1O43586 416 aa20.6■□□□□ 0.89
AC009041.2-204ENST00000568394 CSDE1O75534 798 aaKnown RBP20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms