RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 CLDN10P78369 228 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 SIM2Q14190 667 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 SGSM1Q2NKQ1 1148 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 ZACNQ401N2 412 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 C12orf29Q8N999 325 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 SCAMP5Q8TAC9 235 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 ERCC4Q92889 916 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 FBXO32Q969P5 355 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 JAKMIP2Q96AA8 810 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 P2RY13Q9BPV8 354 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 IER2Q9BTL4 223 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 TTLL2Q9BWV7 592 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 SCAND2PQ9GZW5 306 aaPredicted RBP12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 RAB23Q9ULC3 237 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 ARHGAP26Q9UNA1 814 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 ATP6V1DQ9Y5K8 247 aa12.99□□□□□ -0.33
GTF3C1-208ENST00000567843 NCOR2Q9Y618 2525 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 DENND4CQ5VZ89 1909 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 OBSL1O75147 1896 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 A0A1W2PQ27 194 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 A0A1W2PQ64 194 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 A0A1W2PQD8 194 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 AP1G2O75843 785 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 BEST1O76090 585 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 MYL1P05976 194 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 ADORA2BP29275 332 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 NOP14P78316 857 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 PPP3CAQ08209 521 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 SPEM2Q0P670 501 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 PNOCQ13519 176 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 FILIP1Q7Z7B0 1213 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 LONP2Q86WA8 852 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 FAM186BQ8IYM0 893 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 FUKQ8N0W3 1084 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 NUP93Q8N1F7 819 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 SLC2A14Q8TDB8 520 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 TMC2Q8TDI7 906 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 TAS1R2Q8TE23 839 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 EZH1Q92800 747 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 CD101Q93033 1021 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 SLITRK1Q96PX8 696 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 TWNKQ96RR1 684 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 VRTNQ9H8Y1 702 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 APOBEC3GQ9HC16 384 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 PARD6AQ9NPB6 346 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 KRT82Q9NSB4 513 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 CFAP97Q9P2B7 532 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 GMEB2Q9UKD1 530 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 TRAF3IP3Q9Y228 551 aa12.98□□□□□ -0.33
GTF3C1-208ENST00000567843 ASS1P00966 412 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 KRT13P13646 458 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 CD58P19256 250 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 ASPAP45381 313 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 PGFP49763 221 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 SLC5A3P53794 718 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 SEC13P55735 322 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 MAP3K7CLP57077 242 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 AMPD2Q01433 879 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 ADAM9Q13443 819 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 RSPO4Q2I0M5 234 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 CEP68Q76N32 757 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 SYNPOQ8N3V7 929 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 ZMIZ2Q8NF64 920 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 RPLP0P6Q8NHW5 317 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 SECISBP2LQ93073 1101 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 ATP2A3Q93084 1043 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 TNIP3Q96KP6 325 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 HHIPQ96QV1 700 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 SMOQ99835 787 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 CCSER2Q9H7U1 834 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 DMAP1Q9NPF5 467 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 EHD2Q9NZN4 543 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 GMIPQ9P107 970 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 SLC8A2Q9UPR5 921 aa12.97□□□□□ -0.33
GTF3C1-208ENST00000567843 ATP8B3O60423 1300 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 DMXL1Q9Y485 3027 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 COCHO43405 550 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 KIF20AO95235 890 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 NFATC1O95644 943 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 OAS1P00973 400 aaKnown RBP12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 IRF1P10914 325 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 P4HA1P13674 534 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 DRD1P21728 446 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 SLC6A11P48066 632 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 PDE6CP51160 858 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 SLC7A9P82251 487 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 NR1H3Q13133 447 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 SFTPA1Q8IWL2 248 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 GUF1Q8N442 669 aaKnown RBP12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 WBP2Q969T9 261 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 SMARCD1Q96GM5 515 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 CEP295NLQ96MC4 621 aa12.96□□□□□ -0.33
GTF3C1-208ENST00000567843 CACNA1AO00555 2505 aa12.96□□□□□ -0.34
GTF3C1-208ENST00000567843 PTPRDP23468 1912 aa12.96□□□□□ -0.34
GTF3C1-208ENST00000567843 ANAPC1Q9H1A4 1944 aa12.96□□□□□ -0.34
GTF3C1-208ENST00000567843 DCHS1Q96JQ0 3298 aa12.95□□□□□ -0.34
GTF3C1-208ENST00000567843 GOLGA6L4A6NEF3 574 aa12.95□□□□□ -0.34
GTF3C1-208ENST00000567843 TNFRSF10BO14763 440 aa12.95□□□□□ -0.34
GTF3C1-208ENST00000567843 IKBKBO14920 756 aa12.95□□□□□ -0.34
GTF3C1-208ENST00000567843 ATG13O75143 517 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms