RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 MED10Q9BTT4 135 aa21.44■■□□□ 1.02
CLN6-207ENST00000566347 TMEM30AQ9NV96 361 aa21.44■■□□□ 1.02
CLN6-207ENST00000566347 NFATC1O95644 943 aa21.43■■□□□ 1.02
CLN6-207ENST00000566347 OLFM2O95897 454 aa21.43■■□□□ 1.02
CLN6-207ENST00000566347 NR2F2P24468 414 aa21.43■■□□□ 1.02
CLN6-207ENST00000566347 YWHAQP27348 245 aa21.43■■□□□ 1.02
CLN6-207ENST00000566347 GALK1P51570 392 aa21.43■■□□□ 1.02
CLN6-207ENST00000566347 DMWDQ09019 674 aa21.43■■□□□ 1.02
CLN6-207ENST00000566347 SIM2Q14190 667 aaPredicted RBP21.43■■□□□ 1.02
CLN6-207ENST00000566347 PRR23BQ6ZRT6 265 aa21.43■■□□□ 1.02
CLN6-207ENST00000566347 SV2AQ7L0J3 742 aa21.43■■□□□ 1.02
CLN6-207ENST00000566347 FAM35AQ86V20 835 aa21.43■■□□□ 1.02
CLN6-207ENST00000566347 GUF1Q8N442 669 aaKnown RBP21.43■■□□□ 1.02
CLN6-207ENST00000566347 OVCA2Q8WZ82 227 aa21.43■■□□□ 1.02
CLN6-207ENST00000566347 RMDN1Q96DB5 314 aa21.43■■□□□ 1.02
CLN6-207ENST00000566347 SMARCD1Q96GM5 515 aa21.43■■□□□ 1.02
CLN6-207ENST00000566347 DMAP1Q9NPF5 467 aaPredicted RBP21.43■■□□□ 1.02
CLN6-207ENST00000566347 C2orf42Q9NWW7 574 aa21.43■■□□□ 1.02
CLN6-207ENST00000566347 LEFTY2O00292 366 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 CACNA1AO00555 2505 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 RNF40O75150 1001 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 ZNF202O95125 648 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 ABL1P00519 1130 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 ASS1P00966 412 aaKnown RBP21.42■■□□□ 1.02
CLN6-207ENST00000566347 OAS1P00973 400 aaKnown RBP21.42■■□□□ 1.02
CLN6-207ENST00000566347 EGFP01133 1207 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 TRIM21P19474 475 aaKnown RBP21.42■■□□□ 1.02
CLN6-207ENST00000566347 RPL13P26373 211 aaKnown RBP21.42■■□□□ 1.02
CLN6-207ENST00000566347 PIK3CAP42336 1068 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 VAMP7P51809 220 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 ENPEPQ07075 957 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 IFRD2Q12894 506 aaPredicted RBP21.42■■□□□ 1.02
CLN6-207ENST00000566347 HEATR6Q6AI08 1181 aaKnown RBP21.42■■□□□ 1.02
CLN6-207ENST00000566347 INTS8Q75QN2 995 aaKnown RBP21.42■■□□□ 1.02
CLN6-207ENST00000566347 WDR5BQ86VZ2 330 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 UNC93AQ86WB7 457 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 CD101Q93033 1021 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 IMPG2Q9BZV3 1241 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 SDCBP2Q9H190 292 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 GOLPH3LQ9H4A5 285 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 SLC8A2Q9UPR5 921 aa21.42■■□□□ 1.02
CLN6-207ENST00000566347 CCDC163A0A0D9SF12 145 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 SLC9A3R1O14745 358 aaPredicted RBP21.41■■□□□ 1.02
CLN6-207ENST00000566347 HRO43593 1189 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 KRT13P13646 458 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 ZXDBP98169 803 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 PUM1Q14671 1186 aaKnown RBP eCLIP21.41■■□□□ 1.02
CLN6-207ENST00000566347 LPAL2Q16609 132 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 C1orf220Q5T0J3 134 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 PKN3Q6P5Z2 889 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 ACOT1Q86TX2 421 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 DDX42Q86XP3 938 aaKnown RBP eCLIP21.41■■□□□ 1.02
CLN6-207ENST00000566347 CCDC26Q8TAB7 109 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 FBXO32Q969P5 355 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 RNF38Q9H0F5 515 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 LINC00597Q9H2U6 94 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 FBRSL1Q9HCM7 1045 aaKnown RBP21.41■■□□□ 1.02
CLN6-207ENST00000566347 COMMD8Q9NX08 183 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 MAPK8IP1Q9UQF2 711 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 CPQQ9Y646 472 aa21.41■■□□□ 1.02
CLN6-207ENST00000566347 LRP3O75074 770 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 AP1G2O75843 785 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 AKAP3O75969 853 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 HLA-DRAP01903 254 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 RETP07949 1114 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 SDHBP21912 280 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 NDST1P52848 882 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 LMNB2Q03252 620 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 PAQR9Q6ZVX9 377 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 FAM186BQ8IYM0 893 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 FUKQ8N0W3 1084 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 CRYBG2Q8N1P7 616 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 ELMO3Q96BJ8 720 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 KCNK16Q96T55 309 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 KRT82Q9NSB4 513 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 USP18Q9UMW8 372 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 ATG2BQ96BY7 2078 aa21.4■■□□□ 1.02
CLN6-207ENST00000566347 PRR5-ARHGAP8B1AHC4 643 aa21.39■■□□□ 1.01
CLN6-207ENST00000566347 PSMC2P35998 433 aaKnown RBP21.39■■□□□ 1.01
CLN6-207ENST00000566347 ASPAP45381 313 aa21.39■■□□□ 1.01
CLN6-207ENST00000566347 SLC5A3P53794 718 aa21.39■■□□□ 1.01
CLN6-207ENST00000566347 ARHGAP8P85298 464 aa21.39■■□□□ 1.01
CLN6-207ENST00000566347 NAIF1Q69YI7 327 aaPredicted RBP21.39■■□□□ 1.01
CLN6-207ENST00000566347 CEP68Q76N32 757 aa21.39■■□□□ 1.01
CLN6-207ENST00000566347 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.39■■□□□ 1.01
CLN6-207ENST00000566347 CAMKK1Q8N5S9 505 aa21.39■■□□□ 1.01
CLN6-207ENST00000566347 SMPD4Q9NXE4 827 aa21.39■■□□□ 1.01
CLN6-207ENST00000566347 DLL3Q9NYJ7 618 aa21.39■■□□□ 1.01
CLN6-207ENST00000566347 IL37Q9NZH6 218 aa21.39■■□□□ 1.01
CLN6-207ENST00000566347 TNFRSF10BO14763 440 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 MBL2P11226 248 aaPredicted RBP21.38■■□□□ 1.01
CLN6-207ENST00000566347 TUBP50607 506 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 SRSF5Q13243 272 aaKnown RBP21.38■■□□□ 1.01
CLN6-207ENST00000566347 ADAM9Q13443 819 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 BECN1Q14457 450 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 HECTD3Q5T447 861 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 SNX30Q5VWJ9 437 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 SPOPLQ6IQ16 392 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 DGLUCYQ7Z3D6 616 aa21.38■■□□□ 1.01
CLN6-207ENST00000566347 FILIP1Q7Z7B0 1213 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms