RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 MCOLN2Q8IZK6 566 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 LRRC43Q8N309 656 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 CPA5Q8WXQ8 436 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 VWCEQ96DN2 955 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 CCDC114Q96M63 670 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 PAAF1Q9BRP4 392 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 COLEC11Q9BWP8 271 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 AP1M1Q9BXS5 423 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 DDX47Q9H0S4 455 aaKnown RBP9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 RAB17Q9H0T7 212 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 SLC40A1Q9NP59 571 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 AVENQ9NQS1 362 aaPredicted RBP9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 BCCIPQ9P287 314 aaKnown RBP eCLIP9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 UVRAGQ9P2Y5 699 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 CACNG4Q9UBN1 327 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 HESX1Q9UBX0 185 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 TTC7AQ9ULT0 858 aaPredicted RBP9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 PCDHB8Q9UN66 801 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 BRCA2P51587 3418 aa9.9□□□□□ -0.82
CNEP1R1-206ENST00000565556 CARNS1A5YM72 827 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 DAPK3O43293 454 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 TADA2AO75478 443 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 MICAL2O94851 1124 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 CYP1A2P05177 515 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 CFHP08603 1231 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 PDGFRBP09619 1106 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 SETSIPP0DME0 302 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 MMP8P22894 467 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 LMO2P25791 158 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 ITGB8P26012 769 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 SNX16P57768 344 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 ORC1Q13415 861 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 LACTB2Q53H82 288 aaPredicted RBP9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 ANKRD20A8PQ5CZ79 823 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 GKAP1Q5VSY0 366 aaPredicted RBP9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 DENND1BQ6P3S1 775 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 CD300LGQ6UXG3 332 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 MON1BQ7L1V2 547 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 DDX42Q86XP3 938 aaKnown RBP eCLIP9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 THEM5Q8N1Q8 247 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 GPATCH11Q8N954 259 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 OR2W6PQ8NHA6 318 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 SLC35G2Q8TBE7 412 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 TOP1MTQ969P6 601 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 ZNF653Q96CK0 615 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 NAP1L3Q99457 506 aaPredicted RBP9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 HTATIP2Q9BUP3 242 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 MIS12Q9H081 205 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 NEUROG2Q9H2A3 272 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 NRDE2Q9H7Z3 1164 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 ADAM22Q9P0K1 906 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 CTTNBP2NLQ9P2B4 639 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 CDH9Q9ULB4 789 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 STRIP2Q9ULQ0 834 aa9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 NOVA2Q9UNW9 492 aaKnown RBP9.9□□□□□ -0.83
CNEP1R1-206ENST00000565556 GOLGA6L10A0A0M3HER8 536 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 M0QYV0 167 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 PPFIA2O75334 1257 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 DGKIO75912 1065 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 MTA2O94776 668 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 UPP2O95045 317 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 PTPN1P18031 435 aaKnown RBP9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 BRCC3P46736 316 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 FPGSQ05932 587 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 IFFO1Q0D2I5 559 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 ELAVL2Q12926 359 aaKnown RBP9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 SNCBQ16143 134 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 PREPLQ4J6C6 727 aaPredicted RBP9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 PPP1R26Q5T8A7 1209 aaPredicted RBP9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 DAAM2Q86T65 1068 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 NT5DC3Q86UY8 548 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 OSTM1Q86WC4 334 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 ERICH1Q86X53 443 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 DNAAF5Q86Y56 855 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 B3GALNT2Q8NCR0 500 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 RAPGEF5Q92565 580 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 CENPTQ96BT3 561 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 HES6Q96HZ4 224 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 SEC16BQ96JE7 1060 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 FMO2Q99518 471 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 ACBD6Q9BR61 282 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 GOLPH3Q9H4A6 298 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 CXorf56Q9H5V9 222 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 MRPL47Q9HD33 250 aaKnown RBP9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 DDX43Q9NXZ2 648 aaKnown RBP9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 DNAJB4Q9UDY4 337 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 CNOT8Q9UFF9 292 aaKnown RBP9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 AMACRQ9UHK6 382 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 TSPAN16Q9UKR8 245 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 AMFRQ9UKV5 643 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 ALPK3Q96L96 1907 aa9.89□□□□□ -0.83
CNEP1R1-206ENST00000565556 TSC2P49815 1807 aa9.88□□□□□ -0.83
CNEP1R1-206ENST00000565556 FAM187AA6NFU0 413 aa9.88□□□□□ -0.83
CNEP1R1-206ENST00000565556 NRP1O14786 923 aa9.88□□□□□ -0.83
CNEP1R1-206ENST00000565556 SYN3O14994 580 aa9.88□□□□□ -0.83
CNEP1R1-206ENST00000565556 TTI1O43156 1089 aa9.88□□□□□ -0.83
CNEP1R1-206ENST00000565556 B4GALT3O60512 393 aa9.88□□□□□ -0.83
CNEP1R1-206ENST00000565556 FGBP02675 491 aa9.88□□□□□ -0.83
CNEP1R1-206ENST00000565556 IGFBP6P24592 240 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms