RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 PEX26Q7Z412 305 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 XYLT1Q86Y38 959 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 FIBCD1Q8N539 461 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 KCTD13Q8WZ19 329 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 PABPC5Q96DU9 382 aaKnown RBP20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 MCRS1Q96EZ8 462 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 SMARCD1Q96GM5 515 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 PCED1BQ96HM7 432 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 IGSF21Q96ID5 467 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 GPR62Q9BZJ7 368 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 ZCWPW1Q9H0M4 648 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 ST7Q9NRC1 585 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 AAASQ9NRG9 546 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 CLDND1Q9NY35 253 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 HCSTQ9UBK5 93 aa20.1■□□□□ 0.81
CSPG4P13-201ENST00000565545 FAM170AA1A519 330 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 EFEMP2O95967 443 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 ERBB2P04626 1255 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 ATP1A1P05023 1023 aaKnown RBP20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 CTNNB1P35222 781 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 SCNN1AP37088 669 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 NFE2Q16621 373 aaPredicted RBP20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 C2CD6Q53TS8 623 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 PPP1R15BQ5SWA1 713 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 SPOUT1Q5T280 376 aaKnown RBP20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 PMF1Q6P1K2 205 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 ANKS3Q6ZW76 656 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 FAM35AQ86V20 835 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 OR10T2Q8NGX3 314 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 MYLPFQ96A32 169 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 SELENOOQ9BVL4 669 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 L2HGDHQ9H9P8 463 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 STK39Q9UEW8 545 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 ANAPC7Q9UJX3 599 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 SAR1BQ9Y6B6 198 aa20.09■□□□□ 0.81
CSPG4P13-201ENST00000565545 TMEM191CA6NGB0 347 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 NT5C1B-RDH14C9J2C7 533 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 ENC1O14682 589 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 DCXO43602 365 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 NCK2O43639 380 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 TCP1P17987 556 aaKnown RBP20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 SLC1A1P43005 524 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 AMPD2Q01433 879 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 SMARCB1Q12824 385 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 RPS6KA1Q15418 735 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 USP41Q3LFD5 358 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 CTXN3Q4LDR2 81 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 CYP4A22Q5TCH4 519 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 DCUN1D2Q6PH85 259 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 CLEC20AQ6ZU45 233 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 NT5DC3Q86UY8 548 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 RNF168Q8IYW5 571 aaPredicted RBP20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 SLC39A11Q8N1S5 342 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 TTPALQ9BTX7 342 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 TLR10Q9BXR5 811 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 KRT82Q9NSB4 513 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 IP6K2Q9UHH9 426 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 CDC23Q9UJX2 597 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 SNX12Q9UMY4 172 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 HYOU1Q9Y4L1 999 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 ALG6Q9Y672 507 aa20.08■□□□□ 0.81
CSPG4P13-201ENST00000565545 PTPRDP23468 1912 aa20.08■□□□□ 0.8
CSPG4P13-201ENST00000565545 MIF4GDA9UHW6 222 aaKnown RBP20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 E5RJQ4 531 aa20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 AP1G2O75843 785 aa20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 FTCDO95954 541 aa20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 KRT3P12035 628 aa20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 MAN1A1P33908 653 aa20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 PPM1AP35813 382 aa20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 MESDQ14696 234 aa20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 CEP57Q86XR8 500 aa20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 COLGALT1Q8NBJ5 622 aa20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 FNIP1Q8TF40 1166 aa20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 FUBP3Q96I24 572 aaKnown RBP eCLIP20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 CSNK1G1Q9HCP0 422 aa20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 SPG21Q9NZD8 308 aa20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 CHORDC1Q9UHD1 332 aaPredicted RBP20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 MRPL42Q9Y6G3 142 aaKnown RBP20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 NLRC5Q86WI3 1866 aa20.07■□□□□ 0.8
CSPG4P13-201ENST00000565545 TULP2O00295 520 aa20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 CLDN5O00501 218 aa20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 TBC1D4O60343 1298 aa20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 RB1P06400 928 aa20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 RGS7P49802 495 aa20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 SLC6A3Q01959 620 aa20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 OR6B2Q6IFH4 312 aa20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 PHLDB2Q86SQ0 1253 aa20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 PIGZQ86VD9 579 aa20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 LRRTM3Q86VH5 581 aa20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 TMEM173Q86WV6 379 aaPredicted RBP20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 SPATA2LQ8IUW3 424 aaPredicted RBP20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 TMEM169Q96HH4 297 aa20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 C11orf84Q9BUA3 381 aaPredicted RBP20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 PNPLA8Q9NP80 782 aa20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 PRKAG3Q9UGI9 489 aa20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 MRFAP1Q9Y605 127 aa20.06■□□□□ 0.8
CSPG4P13-201ENST00000565545 GOLGA8SH3BPF8 625 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 CES2O00748 559 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 PROSCO94903 275 aa20.05■□□□□ 0.8
CSPG4P13-201ENST00000565545 SOD2P04179 222 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms