RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 CLDN5O00501 218 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 TRIM66O15016 1216 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 NFATC1O95644 943 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 APBB3O95704 486 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 OAS1P00973 400 aaKnown RBP9.14□□□□□ -0.95
CAPN3-213ENST00000565173 CYP17A1P05093 508 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 CCDC192P0DO97 292 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 ANXA13P27216 316 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 ATICP31939 592 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 CASP4P49662 377 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 PDE6CP51160 858 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 CDH8P55286 799 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 NR1H3Q13133 447 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 KNOP1Q1ED39 458 aaKnown RBP9.14□□□□□ -0.95
CAPN3-213ENST00000565173 AASDHQ4L235 1098 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-213ENST00000565173 FOXD4L5Q5VV16 416 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-213ENST00000565173 TDRD10Q5VZ19 366 aaKnown RBP9.14□□□□□ -0.95
CAPN3-213ENST00000565173 RESP18Q5W5W9 173 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 RHBDF2Q6PJF5 856 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 HS2ST1Q7LGA3 356 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 B3GALNT2Q8NCR0 500 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 OR6B3Q8NGW1 331 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 PARD3BQ8TEW8 1205 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 TMEM174Q8WUU8 243 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 FOXD4L4Q8WXT5 416 aaPredicted RBP9.14□□□□□ -0.95
CAPN3-213ENST00000565173 SNX21Q969T3 373 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 EXOC4Q96A65 974 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 ZFRQ96KR1 1074 aaKnown RBP9.14□□□□□ -0.95
CAPN3-213ENST00000565173 KCNK16Q96T55 309 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 VRTNQ9H8Y1 702 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 MAGEF1Q9HAY2 307 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 DMAC2Q9NW81 257 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 SMPD4Q9NXE4 827 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 IL37Q9NZH6 218 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 EHD2Q9NZN4 543 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 CGNQ9P2M7 1197 aaKnown RBP9.14□□□□□ -0.95
CAPN3-213ENST00000565173 NXF1Q9UBU9 619 aaKnown RBP9.14□□□□□ -0.95
CAPN3-213ENST00000565173 PCDHA7Q9UN72 937 aa9.14□□□□□ -0.95
CAPN3-213ENST00000565173 HELZP42694 1942 aaKnown RBP9.13□□□□□ -0.95
CAPN3-213ENST00000565173 A8MXQ7 604 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 TNFRSF10BO14763 440 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 SCAMP3O14828 347 aaKnown RBP9.13□□□□□ -0.95
CAPN3-213ENST00000565173 KLRC4O43908 158 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 C4BPAP04003 597 aaKnown RBP9.13□□□□□ -0.95
CAPN3-213ENST00000565173 ZSCAN22P10073 491 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-213ENST00000565173 HNRNPLP14866 589 aaKnown RBP eCLIP9.13□□□□□ -0.95
CAPN3-213ENST00000565173 MPLP40238 635 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 AFMP43652 599 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 SLC6A11P48066 632 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 TNNC1P63316 161 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 STK4Q13043 487 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 PSMD2Q13200 908 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 DHCR24Q15392 516 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 FOXD4L6Q3SYB3 417 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-213ENST00000565173 C2orf27AQ580R0 203 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 STPG1Q5TH74 334 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 SNX30Q5VWJ9 437 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 FOXD4L3Q6VB84 417 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-213ENST00000565173 FILIP1Q7Z7B0 1213 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 RASSF3Q86WH2 238 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 GRAMD1CQ8IYS0 662 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 NUP93Q8N1F7 819 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 C12orf50Q8NA57 414 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-213ENST00000565173 SYAP1Q96A49 352 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-213ENST00000565173 ACDQ96AP0 544 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 ELMO3Q96BJ8 720 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 ELOVL4Q9GZR5 314 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 SDCBP2Q9H190 292 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 SMYD3Q9H7B4 428 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 CHORDC1Q9UHD1 332 aaPredicted RBP9.13□□□□□ -0.95
CAPN3-213ENST00000565173 RCOR1Q9UKL0 485 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 INVSQ9Y283 1065 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 CPQQ9Y646 472 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 SPAG17Q6Q759 2223 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 SPEGQ15772 3267 aa9.13□□□□□ -0.95
CAPN3-213ENST00000565173 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-213ENST00000565173 FAM92AA1XBS5 289 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 BCLAF3A2AJT9 711 aaKnown RBP9.12□□□□□ -0.95
CAPN3-213ENST00000565173 LRRIQ3A6PVS8 624 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-213ENST00000565173 COCHO43405 550 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 ACTN4O43707 911 aaKnown RBP9.12□□□□□ -0.95
CAPN3-213ENST00000565173 EXOC3O60645 756 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 KRT37O76014 449 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 VNN1O95497 513 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 ABL1P00519 1130 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 ZDHHC11BP0C7U3 371 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 YWHAQP27348 245 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 EIF2DP41214 584 aaKnown RBP9.12□□□□□ -0.95
CAPN3-213ENST00000565173 PGFP49763 221 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 SEC13P55735 322 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 DLG4P78352 724 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 MRPS21P82921 87 aaKnown RBP9.12□□□□□ -0.95
CAPN3-213ENST00000565173 TRPC3Q13507 836 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 PKP1Q13835 747 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 CRY1Q16526 586 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 N4BP2L1Q5TBK1 243 aaPredicted RBP9.12□□□□□ -0.95
CAPN3-213ENST00000565173 EMC10Q5UCC4 262 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 IL31Q6EBC2 164 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 TCEAL6Q6IPX3 200 aa9.12□□□□□ -0.95
CAPN3-213ENST00000565173 TMEM92Q6UXU6 159 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms